Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0580
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           27   0.48 
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           27   0.48 
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           27   0.64 
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           27   0.64 
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    27   0.64 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   2.6  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   7.8  

>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    + P PT       + PTA  +T     TT
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTT 204


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    + P PT       + PTA  +T     TT
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTT 204


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    + P PT       + PTA  +T     TT
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTT 205


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    + P PT       + PTA  +T     TT
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTT 205


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    + P PT       + PTA  +T     TT
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTHAPTTTT 205


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +2

Query: 389 PLPWSLP--PMASPHLT--ESPRPTPLMALTGSPPTALASTLGKP 511
           P P  +P  P A P L     P P P+M +   PP  +  T+G P
Sbjct: 87  PRPGMIPGMPGAPPLLMGPNGPLPPPMMGMR--PPPMMVPTMGMP 129


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/44 (27%), Positives = 16/44 (36%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    + P PT       +  TA  +T     TT
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTTT 205


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/44 (27%), Positives = 16/44 (36%)
 Frame = +2

Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITT 520
           P  WS P   +    +   PT       + PTA  +T     TT
Sbjct: 162 PTTWSAPTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTT 205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,596
Number of Sequences: 2352
Number of extensions: 6286
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)