Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0580
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70854-14|AAB09153.1| 81|Caenorhabditis elegans Nematode speci... 30 1.5
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 2.7
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.7
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 28 4.7
AF039046-8|AAB94212.1| 72|Caenorhabditis elegans Caenacin (cae... 28 4.7
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81531-10|CAE17807.1| 367|Caenorhabditis elegans Hypothetical p... 27 8.2
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68106-7|CAA92131.1| 72|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical... 27 8.2
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 27 8.2
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 27 8.2
>U70854-14|AAB09153.1| 81|Caenorhabditis elegans Nematode specific
peptide family,group b protein 5 protein.
Length = 81
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 SPLVTAPYGIAA-PYGIAAPYTAYGAYGVAPYGLGVHAW 504
+P+V++PY A+ P A PY AY AYG A Y + W
Sbjct: 24 TPVVSSPYYYASSPVASAYPY-AY-AYGAAAYPTAYYGW 60
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALAST 499
P+P + P + +SP PTP + + P ALAST
Sbjct: 165 PVPMEIQSQEQP-IKKSPAPTPSLDASNKPVAALAST 200
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 407 PPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTASRYFL 538
PP+ S T SP P+P + PPTA ST KP+ A FL
Sbjct: 374 PPVLSTLATPSPVPSPSV-----PPTAPPSTPRKPMFGAVSQFL 412
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 410 PMASPHLTESPRPTPLMALTGSPPTALASTLGKP 511
P +P + E+P PTP T +P T ++ +G P
Sbjct: 210 PEPAPVVEETPAPTPAAEETPAPATEASNAVGTP 243
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 395 PWSLPPMASPHLTESPRPTPLMALTGSPPTALAS 496
P PP SP PR +P TGSPPT L S
Sbjct: 412 PTGSPPTGSPPTGRPPRGSPP---TGSPPTGLPS 442
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 407 PPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTAS 526
PP SP P+ +P +A +GSPP A+ P T S
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS 271
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 395 PWSLPPMASPHLTESPRPTPLMALTGSPPTALAS 496
P PP SP PR +P TGSPPT L S
Sbjct: 433 PTGSPPTGSPPTGRPPRGSPP---TGSPPTGLPS 463
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 407 PPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTAS 526
PP SP P+ +P +A +GSPP A+ P T S
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS 292
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 395 PWSLPPMASPHLTESPRPTPLMALTGSPPTALAS 496
P PP SP PR +P TGSPPT L S
Sbjct: 418 PTGSPPTGSPPTGRPPRGSPP---TGSPPTGLPS 448
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 407 PPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTAS 526
PP SP P+ +P +A +GSPP A+ P T S
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS 277
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 10/59 (16%)
Frame = +2
Query: 383 HLPLPWSLPPMAS-----PHLTESPRPT-----PLMALTGSPPTALASTLGKPITTASR 529
HLP P LPPM S P+ P T P M SPP A ++ P T+S+
Sbjct: 40 HLPPPSGLPPMVSESYSAPYAQAPPTSTGYPSAPPMPRPSSPPPAYSAIYKPPNMTSSQ 98
>AF039046-8|AAB94212.1| 72|Caenorhabditis elegans Caenacin
(caenorhabditis bacteriocin)protein 2 protein.
Length = 72
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +1
Query: 403 TAPYGIAAPYGIAAPYTAY----GAYGVAPYGLG 492
TA YG G+ Y Y G YG+ PYG+G
Sbjct: 17 TAQYGYGGYPGMMGGYGGYPGMMGGYGMRPYGMG 50
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 383 HLPLPWSLP-PMASPHLTESPRPTPLMALT-GSPPTALASTLGKPITTASRY 532
H +P S P P S + P P L GSP A T G P T + Y
Sbjct: 220 HQQIPTSAPEPSVSSGTPTTGTPAPNTPLAQGSPLPGAAPTFGNPATNTTSY 271
>Z81531-10|CAE17807.1| 367|Caenorhabditis elegans Hypothetical
protein F36D3.13 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 517 DREPLFSNISYAKIACFFLIPDIIE*RCTIGLV 615
D E F N+++ + FFLIP II TI L+
Sbjct: 214 DGEITFQNLTFLEGIVFFLIPSIILPIATISLI 246
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +2
Query: 383 HLPLPWS-LPPMASPHLTESPR----PTPLMALTGSPPTALASTLGKPI 514
+LP P +PP P LT P+ PT L T S A S GK +
Sbjct: 637 NLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFTGKAL 685
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +2
Query: 383 HLPLPWS-LPPMASPHLTESPR----PTPLMALTGSPPTALASTLGKPI 514
+LP P +PP P LT P+ PT L T S A S GK +
Sbjct: 637 NLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFTGKAL 685
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 392 LPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTASRYFL 538
LP + PP+ P +T SP +PL + SP L P T AS+ F+
Sbjct: 514 LPTAPPPVEKP-VTPSPSASPLPSPVSSPAPQLVQKPTTP-TDASKPFV 560
>Z68106-7|CAA92131.1| 72|Caenorhabditis elegans Hypothetical
protein F41E7.8 protein.
Length = 72
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 421 AAPYGIAAPYTAYGAYGVAPYGLGVHAW 504
+A +G PY YG YG G G W
Sbjct: 18 SAQWGYGRPYGGYGGYGGGYGGYGPRPW 45
>AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical
protein Y39B6A.38 protein.
Length = 410
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 386 LPLPWSLPPMASPHLTESPRPTPLMALTGSPPTA 487
+P+P LP A P LTE PR +A T SP A
Sbjct: 131 VPIPDVLPGFARPPLTE-PRAPSTVAATPSPAGA 163
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +2
Query: 383 HLPLPWS-LPPMASPHLTESPR----PTPLMALTGSPPTALASTLGKPI 514
+LP P +PP P LT P+ PT L T S A S GK +
Sbjct: 637 NLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFTGKAL 685
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +2
Query: 383 HLPLPWS-LPPMASPHLTESPR----PTPLMALTGSPPTALASTLGKPI 514
+LP P +PP P LT P+ PT L T S A S GK +
Sbjct: 637 NLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFTGKAL 685
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,038,495
Number of Sequences: 27780
Number of extensions: 134697
Number of successful extensions: 700
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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