Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0579
         (688 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0237 + 1782593-1782778,1784942-1784996,1785086-1787028,178...    30   2.0  
11_01_0240 + 1852186-1852371,1854183-1854237,1854391-1856267,185...    30   2.0  

>12_01_0237 +
           1782593-1782778,1784942-1784996,1785086-1787028,
           1787103-1787261,1787432-1787603,1787705-1788003,
           1788278-1788583
          Length = 1039

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 301 ICLAKFMVKEQCTVPLLKWFKTQQLWMLN 215
           + L +F++ +  TV LLKW+ T  L ++N
Sbjct: 371 VLLVRFLIDKGMTVGLLKWYSTDALTIVN 399


>11_01_0240 +
           1852186-1852371,1854183-1854237,1854391-1856267,
           1856342-1856500,1856692-1856863,1856965-1857263,
           1857539-1857844
          Length = 1017

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 301 ICLAKFMVKEQCTVPLLKWFKTQQLWMLN 215
           + L +F++ +  TV LLKW+ T  L ++N
Sbjct: 349 VLLVRFLIDKGMTVGLLKWYSTDALTIVN 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,402,435
Number of Sequences: 37544
Number of extensions: 307942
Number of successful extensions: 538
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)