BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0579
(688 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 25 3.0
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 24 5.2
AF071163-1|AAC79999.1| 218|Anopheles gambiae glutathione S-tran... 24 5.2
AF071160-4|AAC79992.1| 218|Anopheles gambiae glutathione S-tran... 24 5.2
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 23 6.8
AJ304406-1|CAC35454.1| 131|Anopheles gambiae putative epidermal... 23 9.0
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 9.0
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 24.6 bits (51), Expect = 3.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 316 PVKYGYKITDILQEANYRLVK-IITPRIILLKVR 414
P GY++TD++Q+A + +K RII+ +V+
Sbjct: 248 PSLKGYEVTDMMQKALFDFLKHRFESRIIITRVQ 281
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.8 bits (49), Expect = 5.2
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = -1
Query: 325 ISLAFHQCICLAKFMVKEQCTVPLLKWFKTQQLWMLNL 212
+S Q +CL +++ + LL++++ +W+ L
Sbjct: 537 VSSQMQQFLCLQNVLLEPETDELLLQFYEASAIWLTQL 574
>AF071163-1|AAC79999.1| 218|Anopheles gambiae glutathione
S-transferase D1-3 protein.
Length = 218
Score = 23.8 bits (49), Expect = 5.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 545 FQTISIEPCIGVLVNENGMYLW 480
F ++ + CI LV+E+G LW
Sbjct: 43 FLKLNPQHCIPTLVDEDGFVLW 64
>AF071160-4|AAC79992.1| 218|Anopheles gambiae glutathione
S-transferase protein.
Length = 218
Score = 23.8 bits (49), Expect = 5.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 545 FQTISIEPCIGVLVNENGMYLW 480
F ++ + CI LV+E+G LW
Sbjct: 43 FLKLNPQHCIPTLVDEDGFVLW 64
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.4 bits (48), Expect = 6.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 605 FTFT*PRDNDQ*PNHKICNYLMQLNCPN 688
+ FT P P ICN+ Q+ CPN
Sbjct: 497 YEFTCPPGTLFDPALHICNWADQVKCPN 524
>AJ304406-1|CAC35454.1| 131|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 131
Score = 23.0 bits (47), Expect = 9.0
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 286 TWPSKCIDEKPVKYGYKITDILQEANYRLVKIITPRIILLKVRT 417
TW D +++ ++T + + Y L ++I PR+ +++ RT
Sbjct: 78 TWIQNITDLNFLQHIREVTGYVLISLYDLPQVILPRLQIIRGRT 121
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.0 bits (47), Expect = 9.0
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 286 TWPSKCIDEKPVKYGYKITDILQEANYRLVKIITPRIILLKVRT 417
TW D +++ ++T + + Y L ++I PR+ +++ RT
Sbjct: 38 TWIQNITDLNFLQHIREVTGYVLISLYDLPQVILPRLQIIRGRT 81
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,394
Number of Sequences: 2352
Number of extensions: 15415
Number of successful extensions: 279
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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