BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0576 (448 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 32 0.24 >08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062, 2972354-2972425,2972513-2972631,2972858-2972942, 2973096-2973185,2973268-2973369,2973448-2973624, 2973874-2973954,2974511-2974582,2974662-2974756, 2974831-2974919,2975016-2975078,2975161-2975204, 2975554-2975685 Length = 521 Score = 31.9 bits (69), Expect = 0.24 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 448 FFFFFFYATKVLFYH*TNFCI*LRLKV 368 FFFFFF+ +LF+H N+ + LR+KV Sbjct: 307 FFFFFFFCANILFHH-LNYLL-LRMKV 331 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,007,168 Number of Sequences: 37544 Number of extensions: 55632 Number of successful extensions: 90 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 89 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 859680288 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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