Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0575
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.52 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   6.5  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 544 FNSGFSRVFGFITVSLCAAALAHA 473
           + + +S +F  I  SLC A L HA
Sbjct: 70  YKTAYSAIFTVIDFSLCKAILVHA 93


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 228 LCSPSEAVCCSQRLSCTSCLK 290
           L  P++ V C + LSC S L+
Sbjct: 131 LSDPNQCVICHRVLSCKSALQ 151


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 11  RANRQTNKMAYRHSHDHDDDTDGIV 85
           R  ++ NKM +   +  DDD D +V
Sbjct: 140 RRLKKENKMTWEPKNKTDDDDDALV 164


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 788 NTECDDKFVCRNGAPTC 738
           N EC DK +  NG P C
Sbjct: 118 NGECIDKELFCNGKPDC 134


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 788 NTECDDKFVCRNGAPTC 738
           N EC DK +  NG P C
Sbjct: 125 NGECIDKELFCNGKPDC 141


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/49 (18%), Positives = 23/49 (46%)
 Frame = -3

Query: 408 TNSSIRYIMKKPQHVNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVV 262
           T+  +R+ ++K   V R + E   +W      +  + ++ SG+  +  +
Sbjct: 604 TSPKMRHELQKLAQVYRILGETIETWNKLFGYQILLITFQSGLNVVSCI 652


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -3

Query: 333 WRMFLACKFSMFSWTSGMTCMKVVESST 250
           W    AC+     W +  TC ++V   T
Sbjct: 330 WAFSNACEVMAIVWITSETCEEIVAGVT 357


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 147 GIRPHIMEAQKSTTMEMPLA 88
           G+RPH++E  K +    P A
Sbjct: 164 GLRPHLLENVKKSGYTKPTA 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,606
Number of Sequences: 336
Number of extensions: 4161
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)