Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0575
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80447-10|AAB37814.1|  477|Caenorhabditis elegans Hypothetical p...    73   2e-13
Z70306-4|CAH04694.1|  363|Caenorhabditis elegans Hypothetical pr...    73   3e-13
U42437-4|AAA83498.2|  349|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z70306-5|CAO82011.1|  337|Caenorhabditis elegans Hypothetical pr...    54   2e-07
AL032648-3|CAA21695.1|  319|Caenorhabditis elegans Hypothetical ...    50   3e-06
U28944-12|AAA68371.2|  363|Caenorhabditis elegans Hypothetical p...    40   0.002
Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical pr...    34   0.13 
AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical ...    33   0.31 
Z50863-1|CAA90736.3|  353|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U80448-2|AAB37816.1|  321|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen...    28   6.7  
AC024808-3|AAK29925.1|  183|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AL021472-4|CAA16301.1|  149|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.    28   8.8  

>U80447-10|AAB37814.1|  477|Caenorhabditis elegans Hypothetical
           protein F55F8.9 protein.
          Length = 477

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
 Frame = +2

Query: 86  LAKGISMVVLFCASMICGLIPQIIARKFRW--LSVEDAGTFKSTNRVVMTLLSFGGGVLL 259
           + K + M V+F  ++I GL P  +  K R    + + +   K  + V+  L  F GGV L
Sbjct: 5   ILKLVLMFVMFSLTVIVGLSPLKVLHKLRHEAATAQSSSKHKHVSLVLCLLTCFSGGVFL 64

Query: 260 STTFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYI 421
           +T F+H+ PE++EN+E L   +  +  D+ +  LL+C GFF+++ +EE+V + I
Sbjct: 65  ATCFLHLFPELRENLETLDTVHNFR-IDYPVGELLSCLGFFLIFFLEEVVIMII 117



 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 644 LRGLLIVLALSVHELFEGLAVGLENSTSHV 733
           +R +  VLAL +H + EGLA G+++    +
Sbjct: 303 VRSITFVLALGIHSIIEGLAFGVQSGNDTI 332


>Z70306-4|CAH04694.1|  363|Caenorhabditis elegans Hypothetical
           protein C06G8.3b protein.
          Length = 363

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 2/224 (0%)
 Frame = +2

Query: 71  TDGIVLA-KGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGG 247
           T+G  LA + +  +VL   + + G  P ++        ++  G  ++ +  +  L  F G
Sbjct: 2   TEGGYLALQSVLALVLLVVTAVAGSAPLLLLT-----FLKKKGKDQNDSGWLSYLSCFSG 56

Query: 248 GVLLSTTFMHVMPEVQENI-ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIH 424
           GV ++T F+ VMP VQ+   E L+  N+  EF   +  L  C GFF +YLIEE+      
Sbjct: 57  GVFMATCFLDVMPHVQQTYGEILETYNV--EFRLPMNQLFICVGFFFVYLIEEITAKVFG 114

Query: 425 HREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPXXXXXXXXXXXXXXXXXX 604
                +     +   + ++K + T     E  N + S  E+                   
Sbjct: 115 SGGHGHSHGPPIPLTVDIKKEKVTRVQLIE--NGSSSSPET--LMIPIDSRTRHSLVVEE 170

Query: 605 XMPIQVGDDVTSALRGLLIVLALSVHELFEGLAVGLENSTSHVW 736
             P  V D+  + L+ L   +A+S H L EG A+G+++S + +W
Sbjct: 171 TAPWVVSDEKRNLLKSLTFAIAMSFHSLLEGFALGVQDSDAAIW 214


>U42437-4|AAA83498.2|  349|Caenorhabditis elegans Hypothetical
           protein F30B5.7 protein.
          Length = 349

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 50/208 (24%), Positives = 84/208 (40%)
 Frame = +2

Query: 113 LFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGGGVLLSTTFMHVMPEV 292
           +F  +   G++P  I R  +    E    + S       L  F GGV L+T F+ ++P +
Sbjct: 15  MFVVTAAIGIVPLFIVRVMKRSQNESEQGYLSY------LTCFAGGVFLATCFLDIIPHI 68

Query: 293 QENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNGQTDLLVRNL 472
            E  E L     L  + F+    +TCCGFF +Y IEE            NGQ      + 
Sbjct: 69  NEGYEELMETYDLN-WHFAYPQFVTCCGFFFIYFIEEFTTFVF-----GNGQQPGHGHSH 122

Query: 473 SVRKSRCTEGHSNEAKNSTESGIESPXXXXXXXXXXXXXXXXXXXMPIQVGDDVTSALRG 652
           S+ K        N+   +++  +                          V D+ ++ L+ 
Sbjct: 123 SLNK-------GNKITTTSDGRLSPGMPKERKGSVNITNLRMEEASTWVVSDEKSNILKS 175

Query: 653 LLIVLALSVHELFEGLAVGLENSTSHVW 736
           L   +A+S H L EG A+G+++S   ++
Sbjct: 176 LTFAVAMSFHSLLEGFALGVQDSKGRIY 203


>Z70306-5|CAO82011.1|  337|Caenorhabditis elegans Hypothetical
           protein C06G8.3c protein.
          Length = 337

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +2

Query: 71  TDGIVLA-KGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGG 247
           T+G  LA + +  +VL   + + G  P ++        ++  G  ++ +  +  L  F G
Sbjct: 2   TEGGYLALQSVLALVLLVVTAVAGSAPLLLLT-----FLKKKGKDQNDSGWLSYLSCFSG 56

Query: 248 GVLLSTTFMHVMPEVQENI-ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEEL 406
           GV ++T F+ VMP VQ+   E L+  N+  EF   +  L  C GFF +YLIEE+
Sbjct: 57  GVFMATCFLDVMPHVQQTYGEILETYNV--EFRLPMNQLFICVGFFFVYLIEEI 108



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 611 PIQVGDDVTSALRGLLIVLALSVHELFEGLAVGLENSTSHVW 736
           P  V D+  + L+ L   +A+S H L EG A+G+++S + +W
Sbjct: 147 PWVVSDEKRNLLKSLTFAIAMSFHSLLEGFALGVQDSDAAIW 188


>AL032648-3|CAA21695.1|  319|Caenorhabditis elegans Hypothetical
           protein Y54G9A.4 protein.
          Length = 319

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
 Frame = +2

Query: 86  LAKGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGGGVLLST 265
           L K I + V+   ++I GL+P    +   +L+   +   + ++ ++     F GGV LS 
Sbjct: 5   LLKWIMLGVMALMTIIFGLLP---IKVISYLNTTKSAIHQHSSLILSLFSCFAGGVFLSV 61

Query: 266 TFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNG 445
            F+ ++P+  E  E++Q        D+    L+   GFF +YL EEL  +  +    ++ 
Sbjct: 62  CFLDMLPDCLEAWESVQTDTNYTS-DYPFVQLIALLGFFFVYLTEELSSVICNVGHGHSH 120

Query: 446 QTD-LLVRNLSVRKSR 490
             D ++  N++  ++R
Sbjct: 121 SNDPIMESNVTFPRAR 136


>U28944-12|AAA68371.2|  363|Caenorhabditis elegans Hypothetical
           protein C18A3.2 protein.
          Length = 363

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 33/171 (19%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
 Frame = +2

Query: 248 GVLLSTTFMHVMPEVQENIENLQA-RNILQEFDF-SLTPLLTCCGFFIMYLIEELVHIYI 421
           GV ++T F+ ++P V+    +L+  + I+  + +   T  L   GF I+ + E+++H   
Sbjct: 50  GVFIATCFLGLVPHVRHQEMHLRGNQTIVDSYGWIPSTDQLVIIGFLIILITEQIIHGIG 109

Query: 422 H---HREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPXXXXXXXXXXXXXX 592
           H   +   ++G + L   + S++ ++  +    E  +     ++                
Sbjct: 110 HSIGNGHSHSGHSPLATSD-SIKMNKFHDEEEGE-DHVPLVAMDDDADEIIFRQNTSPHH 167

Query: 593 XXXXXMPIQVGDDVTSALRGLLIVLALSVHELFEGLAVGLENSTSHVWYML 745
                   +     +  +R   ++L +SVH  FEG+A+G++N ++  W +L
Sbjct: 168 HAPSSGHCRTAPGGSMNIRVWFLLLGMSVHSFFEGVALGVQNDSNAFWQIL 218


>Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical
           protein F31C3.4 protein.
          Length = 318

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +2

Query: 623 GDDVT--SALRGLLIVLALSVHELFEGLAVGLENSTSHVWYMLG 748
           GD+    S++   ++VLALSVH LFEGL++ + +  S +  + G
Sbjct: 156 GDEAAAQSSIGVAMLVLALSVHALFEGLSLAVTSDASQLLQIFG 199


>AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical
           protein F58E2.3 protein.
          Length = 688

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNLISH 350
           C     V  S+ L CTS   S+ ++K+   G   KN++SH
Sbjct: 296 CEELRNVQSSKELECTSLCTSELSIKVLHNGLLMKNILSH 335


>Z50863-1|CAA90736.3|  353|Caenorhabditis elegans Hypothetical
           protein C14H10.1 protein.
          Length = 353

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 230 LLSFGGGVLLSTTFMHVMPEVQENIEN 310
           LL F  G LL+  F+H++PE  E+ EN
Sbjct: 150 LLGFAIGSLLADVFLHLLPEAYESNEN 176


>U80448-2|AAB37816.1|  321|Caenorhabditis elegans Hypothetical
           protein F59A3.4 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +2

Query: 647 RGLLIVLALSVHELFEGLAVGL 712
           R LL++LA++VH + EGLAVG+
Sbjct: 172 RILLLILAVTVHNIPEGLAVGV 193


>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
           on autosome protein2 protein.
          Length = 1758

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -2

Query: 286 RHDVHESR*EQHTASEGEQSHHHPVRRLERPRVFYGEPSKLSRDDL 149
           +H +H    +QH AS   Q  HHP R    P   Y +PS  +   L
Sbjct: 92  QHQLHHQN-QQHQASTSTQQFHHPQR---PPPPQYDQPSSSTGSSL 133


>AC024808-3|AAK29925.1|  183|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.6 protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 484 LAHAQISDQ*ICLSIILLSVMNVYVHQFFYQI 389
           LA  Q+S + +C+ I+L  V NV+VH  +Y +
Sbjct: 46  LASFQVSIE-VCVRILLSLVHNVFVHASYYNV 76


>Z96047-6|CAB09416.1|  922|Caenorhabditis elegans Hypothetical
           protein DY3.7 protein.
          Length = 922

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNL 341
           CSPS+  CC+     T  L  K   KIC++ +   NL
Sbjct: 564 CSPSQGYCCNPD---TCSLHGKNEEKICRQESECSNL 597


>AL021472-4|CAA16301.1|  149|Caenorhabditis elegans Hypothetical
           protein Y17D7B.4 protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 234 SPSEAVCCSQRLSCTSCLKSKRTLKICKRGT 326
           +PS+AVC    + C + ++   T   CK GT
Sbjct: 74  TPSQAVCNVSNVDCGTYVRGPETWSSCKLGT 104


>AF024614-1|AAB97161.1|  922|Caenorhabditis elegans ADAM 10 protein.
          Length = 922

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNL 341
           CSPS+  CC+     T  L  K   KIC++ +   NL
Sbjct: 564 CSPSQGYCCNPD---TCSLHGKNEEKICRQESECSNL 597


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,918,006
Number of Sequences: 27780
Number of extensions: 401850
Number of successful extensions: 1328
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)