Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0573
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    26   0.31 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 206 YLFYCRYRLN*ILFNCLNTISIMLLIMLVTAHHIITAAPTNIC 334
           Y F   + ++ ILF   NT   +LLIM  +  H  +     +C
Sbjct: 250 YEFNANFTISYILFALFNTFGTILLIMTCSGVHSESQKLVGVC 292


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 159 VASIP*RRMLRISWTARQTNISVLKELGIATRLSASNAF 43
           + S P    L+++ T     ++VLK   +A RLSA+N F
Sbjct: 143 ILSDPNTNKLKLN-TNESYELTVLKSDSLAVRLSAANFF 180


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/83 (24%), Positives = 36/83 (43%)
 Frame = +3

Query: 330 YVHMPTSILWVSFSNNIYSVANRADLTYSIL*YCL*KQSR*SSE*IAIALPIKF*FEPEL 509
           Y+     +LW+S S+ +  + N    TYS   Y L   +      I +A+   + F  E+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYST--YSLFMMAN-----ITVAV---YGFTSEI 271

Query: 510 VGY*FLMKLNLLGIVTDDSYM*F 578
           V +        +G++ D +Y  F
Sbjct: 272 VDHGIRFSFKEIGLLVDSTYCLF 294


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/83 (24%), Positives = 36/83 (43%)
 Frame = +3

Query: 330 YVHMPTSILWVSFSNNIYSVANRADLTYSIL*YCL*KQSR*SSE*IAIALPIKF*FEPEL 509
           Y+     +LW+S S+ +  + N    TYS   Y L   +      I +A+   + F  E+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYST--YSLFMMAN-----ITVAV---YGFTSEI 271

Query: 510 VGY*FLMKLNLLGIVTDDSYM*F 578
           V +        +G++ D +Y  F
Sbjct: 272 VDHGIRFSFKEIGLLVDSTYCLF 294


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 20/83 (24%), Positives = 36/83 (43%)
 Frame = +3

Query: 330 YVHMPTSILWVSFSNNIYSVANRADLTYSIL*YCL*KQSR*SSE*IAIALPIKF*FEPEL 509
           Y+     +LW+S S+ +  + N    TYS   Y L   +      I +A+   + F  E+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYST--YSLFMMAN-----ITVAV---YGFTSEI 271

Query: 510 VGY*FLMKLNLLGIVTDDSYM*F 578
           V +        +G++ D +Y  F
Sbjct: 272 VDHGIRFSFKEIGLLVDSTYCLF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,472
Number of Sequences: 336
Number of extensions: 3613
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)