Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0573
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.4  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   8.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   8.4  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 136 PPLWDGCYSTVIPHS 180
           P ++D CY+TVIPH+
Sbjct: 947 PHVFD-CYTTVIPHT 960


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 287 LVTAHHIITAAPTNICTYADINSLGELQQQY 379
           L+  + + T   TN C +  ++ +G +  QY
Sbjct: 241 LIPFYVVATLGTTNTCAFDRLDEIGPVANQY 271


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 287 LVTAHHIITAAPTNICTYADINSLGELQQQY 379
           L+  + + T   TN C +  ++ +G +  QY
Sbjct: 272 LIPFYVVATLGTTNTCAFDRLDEIGPVANQY 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,488
Number of Sequences: 2352
Number of extensions: 14412
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)