Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0568
         (385 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006335-1|AAP20831.1|  450|Drosophila melanogaster HL06052p pro...    29   1.6  
AY113494-1|AAM29499.1|  339|Drosophila melanogaster RE52005p pro...    29   1.6  
AE014297-4278|AAF56826.3|  385|Drosophila melanogaster CG33203-P...    29   1.6  

>BT006335-1|AAP20831.1|  450|Drosophila melanogaster HL06052p
           protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 193 PAVSK*YLLILSYKFIKNWRCYKIFASTTTWSQRL 89
           P V K +L+I+SY  +  W  YK   +++ W +RL
Sbjct: 306 PPVLK-WLIIVSYCVLSLWGLYKALTASSPWQRRL 339


>AY113494-1|AAM29499.1|  339|Drosophila melanogaster RE52005p
           protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 193 PAVSK*YLLILSYKFIKNWRCYKIFASTTTWSQRL 89
           P V K +L+I+SY  +  W  YK   +++ W +RL
Sbjct: 260 PPVLK-WLIIVSYCVLSLWGLYKALTASSPWQRRL 293


>AE014297-4278|AAF56826.3|  385|Drosophila melanogaster CG33203-PC
           protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 193 PAVSK*YLLILSYKFIKNWRCYKIFASTTTWSQRL 89
           P V K +L+I+SY  +  W  YK   +++ W +RL
Sbjct: 306 PPVLK-WLIIVSYCVLSLWGLYKALTASSPWQRRL 339


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,195,025
Number of Sequences: 53049
Number of extensions: 298034
Number of successful extensions: 498
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)