Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0566
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   1.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.8  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   9.8  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 362 GFTRGPTHSKQEVQPPVKNPLPKTNSNARL 273
           G    P+  +Q  Q P + P P + SNA+L
Sbjct: 276 GLRAPPSSQQQPQQQPSQQPQPSSQSNAQL 305


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 118 TPSARHLPGGTQKNMPPG 65
           +P + HL GG   ++PPG
Sbjct: 100 SPHSNHLLGGPNHHLPPG 117


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 575  LLLRWVHELTTNLVANWLLKPIDIYKLNAPPT 480
            L L W HE+      + L++ +  Y  N P T
Sbjct: 945  LHLNWKHEVHRQSTIDVLIEDLHTYTFNPPET 976


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 575  LLLRWVHELTTNLVANWLLKPIDIYKLNAPPT 480
            L L W HE+      + L++ +  Y  N P T
Sbjct: 946  LHLNWKHEVHRQSTIDVLIEDLHTYTFNPPET 977


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 164  GTIPDSLLKTRIYK 123
            GTI DSL++ RIY+
Sbjct: 981  GTIMDSLVQDRIYR 994


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +3

Query: 174 FIRYAANKILIMIKLIFALLKCTGFGDHDSSGKQSCVTVCFG*RIFYWWLDFLFTVSR 347
           F+R AA   +  +++   LLK    G    + +  C+  CF  R   + +D  F V R
Sbjct: 163 FVR-AAQDCIEFLQIPHKLLKSYSAGSFPDAPETRCLLRCFFLRTGVFHVDTGFDVER 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,614
Number of Sequences: 2352
Number of extensions: 14311
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)