Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0566
         (590 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093823-1|AAH93823.1|  691|Homo sapiens concentrative Na+-nucle...    29   9.3  
BC093821-1|AAH93821.1|  691|Homo sapiens solute carrier family 2...    29   9.3  
AL356134-1|CAH73162.1|  691|Homo sapiens solute carrier family 2...    29   9.3  
AL353787-1|CAI16332.1|  691|Homo sapiens solute carrier family 2...    29   9.3  
AF305210-1|AAG22551.1|  691|Homo sapiens concentrative Na+-nucle...    29   9.3  

>BC093823-1|AAH93823.1|  691|Homo sapiens concentrative
           Na+-nucleoside cotransporter protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 227 VIKMHWFWRP*F*WEAIVRYCLFWVA 304
           ++  HWFW     W ++V   +FW+A
Sbjct: 165 LLNSHWFWLKWVIWSSLVLAVIFWLA 190


>BC093821-1|AAH93821.1|  691|Homo sapiens solute carrier family 28
           (sodium-coupled nucleoside transporter), member 3
           protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 227 VIKMHWFWRP*F*WEAIVRYCLFWVA 304
           ++  HWFW     W ++V   +FW+A
Sbjct: 165 LLNSHWFWLKWVIWSSLVLAVIFWLA 190


>AL356134-1|CAH73162.1|  691|Homo sapiens solute carrier family 28
           (sodium-coupled nucleoside transporter), member 3
           protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 227 VIKMHWFWRP*F*WEAIVRYCLFWVA 304
           ++  HWFW     W ++V   +FW+A
Sbjct: 165 LLNSHWFWLKWVIWSSLVLAVIFWLA 190


>AL353787-1|CAI16332.1|  691|Homo sapiens solute carrier family 28
           (sodium-coupled nucleoside transporter), member 3
           protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 227 VIKMHWFWRP*F*WEAIVRYCLFWVA 304
           ++  HWFW     W ++V   +FW+A
Sbjct: 165 LLNSHWFWLKWVIWSSLVLAVIFWLA 190


>AF305210-1|AAG22551.1|  691|Homo sapiens concentrative
           Na+-nucleoside cotransporter hCNT3 protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 227 VIKMHWFWRP*F*WEAIVRYCLFWVA 304
           ++  HWFW     W ++V   +FW+A
Sbjct: 165 LLNSHWFWLKWVIWSSLVLAVIFWLA 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,243,459
Number of Sequences: 237096
Number of extensions: 2172676
Number of successful extensions: 3866
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3866
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)