Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0566
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    28   8.2  
AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein...    28   8.2  
AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA...    28   8.2  

>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 277 DCFPLESWSPKPVHFNNAKINLIIIRILFAAYLININRER 158
           +C     W PK V     ++N + +RIL A  + ++ +E+
Sbjct: 665 ECEHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQ 704


>AJ238707-1|CAB42051.1|  462|Drosophila melanogaster MSTA protein
           protein.
          Length = 462

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 277 DCFPLESWSPKPVHFNNAKINLIIIRILFAAYLININRER 158
           +C     W PK V     ++N + +RIL A  + ++ +E+
Sbjct: 136 ECEHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQ 175


>AE014298-362|AAN09072.1|  462|Drosophila melanogaster CG33548-PA,
           isoform A protein.
          Length = 462

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 277 DCFPLESWSPKPVHFNNAKINLIIIRILFAAYLININRER 158
           +C     W PK V     ++N + +RIL A  + ++ +E+
Sbjct: 136 ECEHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQ 175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,666,655
Number of Sequences: 53049
Number of extensions: 610214
Number of successful extensions: 1523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)