Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0566
         (590 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / he...    29   2.3  
At4g35560.1 68417.m05053 expressed protein                             28   4.1  
At4g30210.2 68417.m04297 NADPH-cytochrome p450 reductase, putati...    28   4.1  
At4g30210.1 68417.m04296 NADPH-cytochrome p450 reductase, putati...    27   7.1  
At3g26932.1 68416.m03370 double-stranded RNA-binding domain (DsR...    27   7.1  
At1g04870.2 68414.m00484 protein arginine N-methyltransferase fa...    27   7.1  
At1g04870.1 68414.m00483 protein arginine N-methyltransferase fa...    27   7.1  

>At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / heat
           shock transcription factor 1 (HSTF1) identical to heat
           shock transcription factor 1 (HSF1) SP:P41151 from
           [Arabidopsis thaliana] ;contains Pfam profile: PF00447
           HSF-type DNA-binding domain
          Length = 495

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 374 THLRGFTRGPTHSKQEVQ-PPVKNPLPKTNSNARLLPTRIMVSKT 243
           T + G T G T+  + V  PP +NP P T  NA  LP   + SKT
Sbjct: 14  TKMDGVTGGGTNIGEAVTAPPPRNPHPATLLNANSLPPPFL-SKT 57


>At4g35560.1 68417.m05053 expressed protein 
          Length = 917

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 433 LTLQTETRNYFTAEIGRAVVPTCADSQEVLLTVNKKSNHQ 314
           L  QTETR     ++G  V   CAD + ++  VN++S H+
Sbjct: 168 LNEQTETR---MIKLGLHVSEPCADMEMIIADVNEQSKHK 204


>At4g30210.2 68417.m04297 NADPH-cytochrome p450 reductase, putative
           / NADPH-ferrihemoprotein reductase, putative similar to
           NADPH-cytochrome P450 oxydoreductase from [Populus
           balsamifera subsp. trichocarpa x Populus deltoides]
           GI:13183564, GI:13183566
          Length = 711

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 43  SSMWFSVSQVAYFFVCRRADGVQRAFTL*IRVFKRESG 156
           S +W  +SQ AY +VC  A G+ R     +    +E G
Sbjct: 649 SDIWNMISQGAYLYVCGDAKGMARDVHRSLHTIAQEQG 686


>At4g30210.1 68417.m04296 NADPH-cytochrome p450 reductase, putative
           / NADPH-ferrihemoprotein reductase, putative similar to
           NADPH-cytochrome P450 oxydoreductase from [Populus
           balsamifera subsp. trichocarpa x Populus deltoides]
           GI:13183564, GI:13183566
          Length = 726

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 43  SSMWFSVSQVAYFFVCRRADGVQR 114
           S +W  +SQ AY +VC  A G+ R
Sbjct: 649 SDIWNMISQGAYLYVCGDAKGMAR 672


>At3g26932.1 68416.m03370 double-stranded RNA-binding domain
           (DsRBD)-containing protein contains Pfam profile
           PF00035: Double-stranded RNA binding motif
          Length = 301

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 359 IRAGGYHCPAYFCREVVTRFSLKGESAVVTIPRS*NIIISRW 484
           +R+G  H P + C   +   S  GESA        N  I+ W
Sbjct: 51  VRSGPGHIPTFSCTVELAGMSFNGESAKTKKQAEKNAAIAAW 92


>At1g04870.2 68414.m00484 protein arginine N-methyltransferase
           family protein similar to SP|Q96LA8 Protein arginine
           N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
          Length = 383

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 422 LKGESAVVTIPRS*NIIISRWVAHLICR-CLWASVTS*QPSWL 547
           ++G    +++P   ++IIS W+ + + R  ++ SV S +  WL
Sbjct: 124 IEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWL 166


>At1g04870.1 68414.m00483 protein arginine N-methyltransferase
           family protein similar to SP|Q96LA8 Protein arginine
           N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
          Length = 280

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 422 LKGESAVVTIPRS*NIIISRWVAHLICR-CLWASVTS*QPSWL 547
           ++G    +++P   ++IIS W+ + + R  ++ SV S +  WL
Sbjct: 21  IEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWL 63


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,694,437
Number of Sequences: 28952
Number of extensions: 288110
Number of successful extensions: 624
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)