Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0565
         (624 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023773-1|AAZ41781.1|  458|Drosophila melanogaster LD42725p pro...    28   8.9  
AY052058-1|AAK93482.1|  529|Drosophila melanogaster LP08674p pro...    28   8.9  
AE013599-431|AAF59243.2|  586|Drosophila melanogaster CG1620-PA ...    28   8.9  

>BT023773-1|AAZ41781.1|  458|Drosophila melanogaster LD42725p
           protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 130 LSPPSPIKTPATPYTLLLRFSACGSHTLTV 219
           + PP+PI  PATP    L  S  G   L V
Sbjct: 352 IEPPAPITAPATPPRAPLATSGAGDQELVV 381


>AY052058-1|AAK93482.1|  529|Drosophila melanogaster LP08674p
           protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 130 LSPPSPIKTPATPYTLLLRFSACGSHTLTV 219
           + PP+PI  PATP    L  S  G   L V
Sbjct: 294 IEPPAPITAPATPPRAPLATSGAGDQELVV 323


>AE013599-431|AAF59243.2|  586|Drosophila melanogaster CG1620-PA
           protein.
          Length = 586

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 130 LSPPSPIKTPATPYTLLLRFSACGSHTLTV 219
           + PP+PI  PATP    L  S  G   L V
Sbjct: 351 IEPPAPITAPATPPRAPLATSGAGDQELVV 380


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,296,066
Number of Sequences: 53049
Number of extensions: 587056
Number of successful extensions: 1289
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)