Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0565
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    27   0.11 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.26 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.26 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.2  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   5.6  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   5.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.8  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 198 WFPYPYRGGYVKFSLVVRYIIYYFLSNLGHG 290
           W  YP     + + L + YI++ FL+ LG+G
Sbjct: 37  WLVYPEPNPSLHYLLALLYILFTFLALLGNG 67


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 257 NLLFFVKSRSWLLDLNSRVGKMRR 328
           +L +F +  +W+LDLNS + K+ R
Sbjct: 536 DLKYFYEIDNWMLDLNSGLNKITR 559


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 257 NLLFFVKSRSWLLDLNSRVGKMRR 328
           +L +F +  +W+LDLNS + K+ R
Sbjct: 536 DLKYFYEIDNWMLDLNSGLNKITR 559


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -1

Query: 294 KSHDLDLTKNNKLYNGPQAKI*HSRHGKGMGTTSRE 187
           ++HD+ LTK +  +  P   +    H  G+ T  ++
Sbjct: 424 RNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKD 459


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 584 LRSRR*ATNVRNSEF*LDIQVYLKR 510
           LR+ R  ++V+ SEF L   + LKR
Sbjct: 506 LRNFRVRSDVKESEFRLQADIILKR 530


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 55 HREGLGRR 78
          HREGLGRR
Sbjct: 48 HREGLGRR 55



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 77  LRPSPSLCVKGPVRT*RGAHCGRR 6
           L PSP  C K P     G H GR+
Sbjct: 80  LEPSPPFCEKNPKLGILGTH-GRQ 102


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 55 HREGLGRR 78
          HREGLGRR
Sbjct: 49 HREGLGRR 56



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 77  LRPSPSLCVKGPVRT*RGAHCGRR 6
           L PSP  C K P     G H GR+
Sbjct: 81  LEPSPPFCEKNPKLGILGTH-GRQ 103


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +3

Query: 27   TSRTHRPFHAQGG--TRPERARARSFYR 104
            +   ++P  A GG  TRP+R + R++ R
Sbjct: 1018 SQEANKPKPATGGKGTRPKRGKYRNYDR 1045


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,596
Number of Sequences: 438
Number of extensions: 3844
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)