BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0564
(796 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY748844-1|AAV28190.1| 107|Anopheles gambiae cytochrome P450 pr... 26 1.5
>AY748844-1|AAV28190.1| 107|Anopheles gambiae cytochrome P450
protein.
Length = 107
Score = 25.8 bits (54), Expect = 1.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 358 GNHSPSAGPYARLPKRAIKKNCRYQHYQHIE 450
G+ +P PYA LP A +NC + +IE
Sbjct: 32 GDGAPHQNPYAFLPFSAGPRNCIGYKFAYIE 62
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,133
Number of Sequences: 2352
Number of extensions: 17041
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -