Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0563
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 2e-31
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 5e-30
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 104 7e-23
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 75 9e-14
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 64 1e-10
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 3e-07
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 47 2e-05
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 40 0.003
SB_15403| Best HMM Match : CH (HMM E-Value=0) 35 0.067
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 35 0.088
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 35 0.088
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_46783| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0017) 30 2.5
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_15380| Best HMM Match : RA (HMM E-Value=0.11) 29 5.8
SB_7859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 133 bits (321), Expect = 2e-31
Identities = 71/147 (48%), Positives = 96/147 (65%), Gaps = 3/147 (2%)
Frame = +3
Query: 183 NSKYSEELAHESLEWIRMITGEPE-NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKIN 359
++KY +LA ++ WI I GE D+ +EVLKDG +LC++AN + N+ KIN
Sbjct: 61 DAKYDSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKLGGNI--KIN 118
Query: 360 TSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGK 539
+S MAFK MEN FLE +GVP + FQTVDL+E+QN+ V+ + +LGRKA + GK
Sbjct: 119 SSKMAFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK 178
Query: 540 P--SIGPKEAEKNVRNFSEEQLRAGQG 614
++GPKEA N R F+EEQ RAGQG
Sbjct: 179 TCLALGPKEASANPREFTEEQRRAGQG 205
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 128 bits (309), Expect = 5e-30
Identities = 74/179 (41%), Positives = 106/179 (59%), Gaps = 7/179 (3%)
Frame = +3
Query: 180 INSKYSEELAHESLEWIRMITGEPE-NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKI 356
I+SKY E+ +WI + GE +G +D ++ LKDG +LC+LAN + ++ KI
Sbjct: 424 IDSKYDPTKEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRLGGDL--KI 481
Query: 357 NTSSMAFKCMENINAFLE-AARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTY 533
N M FK MENI FL LGV + FQTVDL+E+ N+ +V+ C+ ++GR+A +
Sbjct: 482 NQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRRAYSL 541
Query: 534 GK--PSIGPKEAEKNVRNFSEEQLRAGQGVI-SLQYG--SNKGANQSGINFGNTRHM*N 695
GK P +GPKE+ KN R F+E QL G+ +I S Q G + A SG +FG R + N
Sbjct: 542 GKDVPQLGPKESTKNPRQFTERQLNEGKTIINSFQMGPAAKNVATASGQSFGRQRQIIN 600
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 104 bits (250), Expect = 7e-23
Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 153 GFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGD-MDNFYEVLKDGTLLCKLANN 329
G +A A RKI KY + E+ WI + GE + D+ +VLKDG +L +LA
Sbjct: 9 GMSAAANRKILEKYDPQQEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIK 68
Query: 330 IHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQS 509
+ + K+N +M FK MENI FL LGV + + FQT DL++ N+ S + ++
Sbjct: 69 LGAKI--KVNEQNMPFKQMENIGNFLSHCGHLGVASGDQFQTADLYDNANMTSCQL-IKD 125
Query: 510 LGRKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVI 620
L P++GPKEAE NVR F+EEQLRAG+ ++
Sbjct: 126 L-------DIPTLGPKEAEANVREFTEEQLRAGESIL 155
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 74.9 bits (176), Expect = 7e-14
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Frame = +3
Query: 177 KINSKYSEELAHESLEWIRMITGEPENTSGDMDN------FYEVLKDGTLLCKLANNIHP 338
++++KY +EL + W+ + G+ + N F E L+ G +LCK+AN I
Sbjct: 265 QVDAKYPKELEGNARRWVETMYGDTVAWGEERPNQRPGETFAEPLRSGVILCKIANKIKS 324
Query: 339 NMIKKINTSSMAFKCMENINAFLE-AARQLGVPAQETFQTVDLWERQNLNSV 491
N I KI S+ +F ENI+ FL+ R LG+ FQTVDL+ERQN+ V
Sbjct: 325 NAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLNLFQTVDLFERQNVGMV 376
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +3
Query: 132 NNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE------PENTSGDMDNFYEVL 293
+N+ G AE RKI SKY EL + +W+ + GE S ++F + +
Sbjct: 9 SNKHKSFGLTAEVNRKIQSKYDTELEMQCRDWLEKMLGENIEWGVETEYSRPGESFADGI 68
Query: 294 KDGTLLC 314
DG +LC
Sbjct: 69 FDGIVLC 75
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 74.5 bits (175), Expect = 9e-14
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 NTSGDM-DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGV 431
N GD D+F LK G +LCKLAN I P IKKIN + M F MENI F + GV
Sbjct: 81 NFGGDTADDFQNTLKSGVVLCKLANAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGV 140
Query: 432 PAQETFQTVDLWERQNLNSV 491
+Q F T+DL+E +N++ V
Sbjct: 141 ASQYQFVTIDLFEGKNMHQV 160
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +3
Query: 384 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKEA 563
MENI FL LGV + FQTVDL+E+QN+ + +A P +GPKEA
Sbjct: 18 MENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA---------RAKGLNCPQLGPKEA 68
Query: 564 EKNVRNFSEEQLRAGQGV 617
E N R+F E++LRAG+G+
Sbjct: 69 EANPRSFDEDKLRAGKGI 86
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 40.3 bits (90), Expect(2) = 3e-07
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 357 NTSSMAFKCMENINAFLEAARQ--LGVPAQETFQTVDLWERQNLNSVVICLQSLGRK 521
N S + ENI FL A ++ Q+ FQTV L+ERQNL V+ +Q+ RK
Sbjct: 889 NRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFARK 945
Score = 31.9 bits (69), Expect(2) = 3e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 540 PSIGPKEAEKNVRNFSEE 593
P GPKEAEKN RNF E+
Sbjct: 986 PLFGPKEAEKNPRNFPEQ 1003
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +3
Query: 321 ANNIHPNMIKK--INTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNL 482
AN I P +IKK +N M FK MENI F+ + GV + F TVDL+E++N+
Sbjct: 188 ANAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +3
Query: 213 ESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMEN 392
E+ WI T P D+F E L DG LLC+L N+ + +IN A +N
Sbjct: 32 EARRWIERATFTPFKN----DDFRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDN 87
Query: 393 INAFLEAARQLGVPAQETFQTVDLWE 470
++ F A LG+ + F+ DL E
Sbjct: 88 LSVFFRACEALGLDKYQLFEHEDLDE 113
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +3
Query: 540 PSIGPKEAEKNVRNFSEEQLRAGQGVI 620
P++GPKEAE NVR F+EEQLRAG+ ++
Sbjct: 10 PTLGPKEAEANVREFTEEQLRAGESIL 36
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAF------KCMENINAFLEAARQLGVP 434
D+ L DG +LC L N+ + I I+ S KCM+N++ FLEA ++LGV
Sbjct: 330 DDLPASLADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVD 389
Query: 435 AQETFQTVDLWERQNLNSVVICLQSL 512
+ + D+ + ++ V +Q+L
Sbjct: 390 RELLCSSADILQEKSPQRVCATVQAL 415
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +3
Query: 276 NFYEVLKDGTLLCKLANNIHPNMIKKINTSSM--AFKCMENINAFLEAARQL-GVPAQET 446
+F + L+DG LLC++AN +HP + + F C++NI FL A +L + +
Sbjct: 50 DFAQSLRDGVLLCQVANVLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDL 109
Query: 447 FQTVDLWERQNLNSVVICLQSL 512
F +L++ + VV L L
Sbjct: 110 FDANELYDVSDFGKVVNTLSKL 131
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 39.5 bits (88), Expect = 0.003
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Frame = +3
Query: 126 MANNRATKSGFAAEAQRK-INSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDG 302
MA A + RK + K+ L + WI + GE E + D F +L G
Sbjct: 1 MAEENANHGTRDFDTDRKGMMEKWLIPLKEDLASWISRLLGEEELNT---DTFTSMLDTG 57
Query: 303 TLLCKLANNI----------HPNM------------IKKINTSSMAFKCMENINAFLEAA 416
+LC+LAN I +P K+ + +F +N++ F+
Sbjct: 58 VVLCRLANFIQTVGEEFFVRNPKFPRRGLFPACGVTYKQRGATHGSFVARDNVSNFIRWC 117
Query: 417 RQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYG 536
R+L VP F+T DL +N +V++ L + RKA G
Sbjct: 118 RELRVPDVIMFETEDLVLNKNEKTVLLTLLEVARKAFKVG 157
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 249 PENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM-AFKCMENINAFLEAAR 419
P + S D + YE +KDG LLCK+ N P I + IN + F EN + +A
Sbjct: 69 PIDASEDSSDLYEKVKDGILLCKMINLSAPGTIDERVINKPPLKVFTIHENQTLVINSAL 128
Query: 420 QLG 428
+G
Sbjct: 129 AIG 131
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 34.7 bits (76), Expect = 0.088
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNI----------HPNMI--KKI--------NTSSMAFKCMEN 392
D F+ L+DGTLLCKLAN I H + KKI + S F EN
Sbjct: 691 DFFFYALEDGTLLCKLANYIQEMADTYGQKHNTHVPGKKIKFKESKRGHRESKLFHSREN 750
Query: 393 INAFLEAARQLGVPAQETFQTVDLWE----RQNLNSVVICLQSLGRKAGTY 533
+ FL R +P F++ D+ R +VICL + R+ Y
Sbjct: 751 VQKFLTWCRWHDIPEAILFESNDVVLVDECRTGGREIVICLMEIARRVIKY 801
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 105 LNCY*FDMANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE 248
L C +MAN R G AE RK+++KY + E+++WI + GE
Sbjct: 652 LVCKDTNMAN-RQKGYGMTAELSRKMSAKYDPVMDAEAVDWIEKVLGE 698
Score = 34.7 bits (76), Expect = 0.088
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 384 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSV 491
M I FL+ GV + FQTVDL+E+QN+ V
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 456 VDLWERQNLNSVVICLQSLG 515
V +W +N +SVV+C+QSLG
Sbjct: 258 VSVWASENTSSVVVCVQSLG 277
>SB_46783| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0017)
Length = 322
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 583 SPRSSSGLVRESYLFSTVQIRAPTKAESTLVT-RDT 687
S R GLVR +L TVQ PTK + VT RDT
Sbjct: 252 SGRVHKGLVRSDHLVVTVQPTIPTKPQRRYVTFRDT 287
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 227 DSDDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDG 373
D+ +H REH + + + S RRH+ + H + K+ ++ G
Sbjct: 569 DNKEHHTRREHFKHNLRFIHSKNRRHAGYYLAMNHLGDRSDKELRVLRG 617
>SB_15380| Best HMM Match : RA (HMM E-Value=0.11)
Length = 2124
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +3
Query: 171 QRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGT-LLCKLANN----IH 335
Q+K+ +KY + ESL+++ + ++ S DM+ + +L+ T + + NN
Sbjct: 1958 QQKLLAKYCLDAQTESLQFLEKLKKRLDDCSKDMNEPFNILQGSTHWIVGMQNNARFLAR 2017
Query: 336 PNMIKKINTSSMAFKCMENINAFLEAARQL---GVPAQETFQTVDLWERQNLNSVVICLQ 506
+ N + F+ + + L+ +QL A T Q V + + L +V +
Sbjct: 2018 DVTLVDTNAKQLNFQVLSAMRTSLDTIQQLVNSCATASTTQQRVSSYRMRILIGIVTDVV 2077
Query: 507 SLGRKAGTYGKPSIGPKEAEKNVRNFSEE 593
L + T + ++ + E + + SE+
Sbjct: 2078 LLYGELITQAQETVRMHDDEASRKRLSEK 2106
>SB_7859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 174 RKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNI 332
R + KY H+ EW R+ G P + +G Y+V+ TL+ N++
Sbjct: 31 RYMTKKYMITQVHDYTEWRRLRCGHPLDLNGKSGEDYDVVILWTLMSGEDNDV 83
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 482 EILSLPQVDSLKSFLRRYTQLSCGFEESVDILH-ALEGHRRCVDLFD 345
E + Q+D LK ++Y Q+ FE+ + IL EG R+ DL D
Sbjct: 611 EFVKKKQLDDLKKLQKKYDQMVEDFEKRIKILEDRSEGQRK--DLID 655
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 185 QQIQRRAGPRVLGMDSDDHRRTREHLR 265
Q+ QR GP+V+G +S D R RE+ +
Sbjct: 2291 QRPQRPMGPQVVGKESRDEARKREYYK 2317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,807,874
Number of Sequences: 59808
Number of extensions: 595631
Number of successful extensions: 1698
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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