Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0563
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          31   0.055
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    24   4.8  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   6.3  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   6.3  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.3  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   8.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.3  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 0.055
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 221 GMDSDDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQ 358
           G D DD+RRT +  RG G+  +    RHS   +S +H     ++D+
Sbjct: 606 GYDRDDYRRTEKDYRGNGKHDKYGSSRHS--DSSSRHRSSKHERDR 649


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 550 DRKKLRRTCETSPRSSSGLVR 612
           + +KLRRT E + +SS+ LVR
Sbjct: 337 ETEKLRRTVEQTGKSSAELVR 357


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 230 SDDHRRTREHL-RGYGQLLRSA*RRHSSVQASQQH 331
           ++  RR RE   +   + L+SA + HS  QA Q+H
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +3

Query: 507 SLGRKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGINFGN 677
           S G   G  G+P I PK +  +V       L++G    ++   S+   N S I+  N
Sbjct: 161 SSGANDGNNGRPEISPKLSPGSVVESVSRSLKSGNPSTAVS-SSSTNNNTSNISNRN 216


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 233  DDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDG 373
            +D RRT E  + + +  R+  +R+   Q +   PP   ++   + DG
Sbjct: 1103 EDERRTEERRQLHNEANRAYRQRNRRSQPTPPAPPPTPREAARLEDG 1149


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 558 EAEKNVRNFSEEQLRAGQGVISLQYG-SNKGANQS 659
           EAE+N RN     LRA +  +S  +  SN G+  +
Sbjct: 318 EAERNARNAQHLLLRANRLTVSDNHNLSNSGSGNT 352


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 735 HACNKPFKCARLDS 694
           H  +KP KC R DS
Sbjct: 321 HTADKPIKCKRCDS 334


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 506 LQADHDGVEILS---LPQVDSLKSFLRRYTQLSCGFEESVDILHALE 375
           LQ DH+ +  L+      +DSLK    +Y +++     + D LH L+
Sbjct: 845 LQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLK 891


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 896,745
Number of Sequences: 2352
Number of extensions: 18877
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)