Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0563
(801 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 43 3e-04
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 43 3e-04
At2g47500.1 68415.m05929 kinesin motor protein-related 42 4e-04
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 37 0.014
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 37 0.014
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 36 0.024
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 35 0.072
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 34 0.13
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 33 0.22
At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing prote... 33 0.29
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 31 0.67
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 31 0.89
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 31 0.89
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 31 1.2
At5g41310.1 68418.m05020 kinesin motor protein-related 30 1.6
At5g01630.1 68418.m00079 BRCA2 repeat-containing protein low sim... 29 2.7
At3g02140.1 68416.m00182 expressed protein 29 2.7
At3g32270.1 68416.m04114 hypothetical protein similar to putativ... 29 4.7
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 29 4.7
At4g15830.1 68417.m02408 expressed protein 28 8.3
At4g04920.1 68417.m00715 expressed protein 28 8.3
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Frame = +3
Query: 123 DMANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITG--EPENTSGDM--DNFYEV 290
D+ +++S RK+ S +E+ W+R + G ++ G+ + F
Sbjct: 21 DVLQQHSSRSSDVGLVSRKVEE--SSLRRYEAAGWLRDMIGVSNGKDFPGEPSEEEFRLG 78
Query: 291 LKDGTLLCKLANNIHPNMIKKI---------NTSSMAFKCMENINAFLEAARQLGVPAQE 443
L+ G +LC + N ++P + K+ + AF+ ENI FL A ++G+P
Sbjct: 79 LRSGIVLCNVLNKVNPGSVSKVVEAPDDVADGAALSAFQYFENIRNFLVAIEEMGLP--- 135
Query: 444 TFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKEAEKNVR-NFSEEQL 599
+F+ D+ + +V C+ +L + K GP N++ NF +L
Sbjct: 136 SFEASDMEKGGKSIRIVNCILALKSYSEWKLKGENGPWRYGSNMKHNFGSRKL 188
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Frame = +3
Query: 186 SKYSEELA---HESLEWIRMITGEPENTSGDMDN-FYEVLKDGTLLCKLANNIHPNMIKK 353
S+ +EE A ++++W++ + G+ + + F L++G +LC N IHP + K
Sbjct: 12 SRRAEEAAARRFQAVQWLKSVVGQLGIPNQPSEKEFISCLRNGMILCNAINKIHPGAVSK 71
Query: 354 I--NTSSM--------AFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS----- 488
+ N S + A++ EN+ FL A L +P F+ DL E+ NL S
Sbjct: 72 VVENYSYLNGEYQLPPAYQYFENVRNFLVALETLRLPG---FEASDL-EKDNLESGSVTK 127
Query: 489 VVICLQSLGRKA 524
VV C+ LG KA
Sbjct: 128 VVDCI--LGLKA 137
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 42.3 bits (95), Expect = 4e-04
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Frame = +3
Query: 186 SKYSEELA---HESLEWIRM---ITGEPENTSGDMDNFYEV-LKDGTLLCKLANNIHPNM 344
S+ +EE A +E+ W+R + G + + + + L+ G +LCK+ N + P
Sbjct: 37 SRRAEEAASRRYEAANWLRRMVGVVGAKDLPAEPTEEGLRLGLRSGIILCKVLNKVQPGA 96
Query: 345 IKKINTSSM------------AFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 488
+ K+ S AF+ EN+ FL A +++G P TF+ DL + N +
Sbjct: 97 VSKVVESPCDAILVADGAPLSAFQYFENVRNFLVAIQEMGFP---TFEASDLEQGGNASR 153
Query: 489 VVICLQSL 512
VV C+ ++
Sbjct: 154 VVNCVLAI 161
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 428
++ +EV KDG LLCKL N P I + INT SM ++ EN L +A+ +G
Sbjct: 155 NDLFEVAKDGVLLCKLINVAVPGTIDERAINTKSMLNPWERNENHTLCLNSAKAIG 210
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Frame = +3
Query: 210 HESLEWIR----MITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKI------- 356
+E+ W+R ++ G ++F L+ G LLC + N + P + K+
Sbjct: 58 YEAARWVRNTLGVVGGRDLPADPSEEDFRIALRSGILLCNVLNRVKPGAVPKVVEAPNDP 117
Query: 357 -----NTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
+ AF+ EN+ FL ++G+P TF+ D + +V C+ +L
Sbjct: 118 LVNQDGAALSAFQYFENLRNFLVFVEEMGIP---TFEVSDFEKGGKSARIVECVLAL 171
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 267 DMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 428
D ++ YE++KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 153 DSNDLYELVKDGVLLCKLINIAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 210
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 279 FYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 428
F++++KDG LLCKL N P I + INT ++ EN+ L +A+ +G
Sbjct: 155 FFDLVKDGVLLCKLINVAVPGTIDERAINTKKTLNPWERNENLTLGLNSAKAIG 208
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 428
+ YE++KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 154 NQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 209
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 282 YEVLKDGTLLCKLANNIHPNMI--KKINTSS--MAFKCMENINAFLEAARQLG 428
++++KDG LLCKL N P I + INT ++ EN++ L +A+ +G
Sbjct: 150 FDLVKDGVLLCKLINIAVPGTIDERAINTKKELNPWERTENLSLCLNSAKAIG 202
>At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: Protein of unknown
function, DUF259
Length = 404
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 227 DSDDHRRTREHLRGYGQLLRSA*R-RHSSVQASQQHPPEHDQKDQH 361
D D H REH R Y Q R R SS S++ P +HD++ +H
Sbjct: 356 DRDRHHDHREHDRNYNQSRGYDSRSRRSSRSRSRERPRDHDRRRRH 401
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNIHPNMIKKI-------------NTSSMAFKCMENINAFLEA 413
D F L++G +LC + N ++P + K+ + A + EN+ FL+A
Sbjct: 16 DEFSLALRNGLILCNVLNKVNPGSVLKVVENPITPAIQYADGAAQSAIQYFENMRNFLKA 75
Query: 414 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
+ + TF DL + + N VV C+ L
Sbjct: 76 VEDMQL---LTFGASDLEKGGSSNKVVDCILCL 105
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 31.1 bits (67), Expect = 0.89
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 452
D L+DGT+LC L N + P ++ + A I FL A ++ +P F+
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALP---RFE 118
Query: 453 TVDLWERQNLNSVVICLQSL--GRKAGTYGKPSIGPK 557
D+ E+ ++ V+ L++L G+Y K S+ +
Sbjct: 119 VSDI-EQGDMVPVLQSLKALKASFSDGSYDKNSLAAR 154
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 31.1 bits (67), Expect = 0.89
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 452
D L+DGT+LC L N + P ++ + A I FL A ++ +P F+
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALP---RFE 118
Query: 453 TVDLWERQNLNSVVICLQSL--GRKAGTYGKPSIGPK 557
D+ E+ ++ V+ L++L G+Y K S+ +
Sbjct: 119 VSDI-EQGDMVPVLQSLKALKASFSDGSYDKNSLAAR 154
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from [Homo
sapiens]; contains Pfam PF02135: TAZ zinc finger profile;
contains Pfam PF00569: Zinc finger, ZZ type domain;
identical to histone acetyltransferase HAC4 (GI:14794966)
{Arabidopsis thaliana}
Length = 1456
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +3
Query: 378 KCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPK 557
K +E FLE R+ P++ +++ ++ Q + +V +CL G +G S GP
Sbjct: 913 KVLEVKERFLELFREENYPSEFPYKSKAIFLFQKIENVEVCL--FGMFVQEFGTDS-GPP 969
Query: 558 EAEKNVRNFSEEQLR 602
+ R S E LR
Sbjct: 970 NERRTFRTVSGEALR 984
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 291 LKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTV 458
L DGT+LC L N + P ++ S C+ NI FL A ++ +P E+ + +
Sbjct: 72 LVDGTVLCNLLNQLSPGSMRM--GGSFEPGCV-NIERFLAAMDEMTLPRFESLKAL 124
>At5g01630.1 68418.m00079 BRCA2 repeat-containing protein low
similarity to breast cancer susceptibility protein
[Gallus gallus] GI:19568157; contains Pfam profile
PF00634: BRCA2 repeat
Length = 1155
Score = 29.5 bits (63), Expect = 2.7
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Frame = +3
Query: 132 NNRATKSGFAAEAQRKINSKYSEELA---HESLEWIRMITGEPENTSGDMDNFYEVLKDG 302
NN + +G+ A ++ N S H S + R + E + G++ ++ D
Sbjct: 319 NNGSVNTGYIAHEEKTSNKHTSNSFVSPLHSSSKQFRSVNLENLASGGNLIKKFDTAVDE 378
Query: 303 TLLCKLANNIHPNMIKKINTSSMAFKCMENI---NAFLEAARQLGVPAQETFQTVDLWER 473
T C L N P N +A N N F+ ARQLG PA + VD+ R
Sbjct: 379 TN-CAL-NISKPATHGLSNNRPLASDMAVNNSKGNGFIPRARQLGRPADQPL--VDITNR 434
Query: 474 QN 479
++
Sbjct: 435 RD 436
>At3g02140.1 68416.m00182 expressed protein
Length = 319
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 338 EHDQKDQHIVDGLQVHGEYQRFPRSRK 418
E D+KD + GL ++G++ PRSRK
Sbjct: 57 EEDEKDVELTLGLSLNGQFGTDPRSRK 83
>At3g32270.1 68416.m04114 hypothetical protein similar to putative
replication protein A1 GB:AAC95163 GI:4006821 from
[Arabidopsis thaliana]
Length = 209
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -3
Query: 502 KQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKALIFSMHLKAIDDVLIFLIMFGWML 326
+ + +LR C ++ K++C CLA+ ++AL FS + ++ +I ++ W L
Sbjct: 144 QNVVNDLRICFKLKN---KINCV--LECLASGKQALDFSQNYHSLGGGVIVAVLGWWKL 197
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +2
Query: 122 RHGKQPSHQIRICS*SPEKDQQQIQRRAGPRVLGMDSDDHRRTREHLRGYGQLLRSA*RR 301
RH H+ R EKD + +R R D D + R+H + + RS R
Sbjct: 79 RHRSSREHRDR----DREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRSER 134
Query: 302 HSSVQASQQ---HPPEHDQKDQ 358
H S + + P E + KD+
Sbjct: 135 HRSQEREKSLEIEPKERETKDR 156
>At4g15830.1 68417.m02408 expressed protein
Length = 296
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -3
Query: 517 LPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKALIFSMHLKAIDDVLIFLIM 341
LP K I ++ + RS + K S + A + L+ HLK++DD+L+ L+M
Sbjct: 97 LPILEKLIVVMVKAMKNPRSALCKTSIMTCSDIFTAYGEKLLEGPHLKSMDDLLLQLLM 155
>At4g04920.1 68417.m00715 expressed protein
Length = 1250
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 127 WQTTEPPNQDLQLKPRERSTANTAKSWPTSPWNGF 231
W+ T P LQ P+ + + S +S W GF
Sbjct: 347 WEVTPGPGNGLQATPKISTGSRVPPSLSSSSWTGF 381
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,569,884
Number of Sequences: 28952
Number of extensions: 413216
Number of successful extensions: 1167
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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