Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0561
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    29   0.11 
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       28   0.24 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    27   0.56 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.74 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.9  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 274 EAQVAQGSFTYTSPEGIPISVSYVAD-ENGF 363
           +  V QGS++   P+G   +V Y AD  NGF
Sbjct: 45  DGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 75


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +2

Query: 212 PAMASQLKNKVTSRTLELRMPKPKLHKDLSLTPPLR 319
           PAM  +L +K+T R + L++PK ++   ++L   L+
Sbjct: 357 PAMIGELVSKMTQRKMYLQLPKMQITNTINLRDVLQ 392


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 123 SATIPRSSNSHPESITGRELRRLI 194
           +A+ P + NS P   TGR+ RR+I
Sbjct: 119 TASTPHNRNSDPRPATGRKRRRII 142


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 162 SITGRELRRLIPVQL-RDRQWHRSSRTRLPQERWS*GCRSPSCTRIFH 302
           S+T R  + L P++  R + W+   R  L Q RW    R P    + H
Sbjct: 9   SVTCRPTKCLHPLRTGRSQGWYMHGRNTLRQMRWPPCYRGPDMRSVGH 56


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 135 PRSSNSHPESITGRELRRL 191
           P +S  +PES+T  E+R +
Sbjct: 391 PTTSQENPESVTDEEIRNI 409


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 361 FRPEGAHLPTPPPIP 405
           F P     PTPPP+P
Sbjct: 795 FTPPTDRTPTPPPLP 809


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,539
Number of Sequences: 2352
Number of extensions: 10018
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)