Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0561
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065200-1|AAH65200.1|  218|Homo sapiens GATS protein protein.         31   3.9  
BC053367-1|AAH53367.1|  240|Homo sapiens GATS protein protein.         31   3.9  
BC033723-1|AAH33723.1|  243|Homo sapiens GATS protein protein.         31   5.2  
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein...    30   6.8  

>BC065200-1|AAH65200.1|  218|Homo sapiens GATS protein protein.
          Length = 218

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 26/84 (30%), Positives = 37/84 (44%)
 Frame = +3

Query: 90  NGLRRPPADTVSATIPRSSNSHPESITGRELRRLIPVQLRDRQWHRSSRTRLPQERWS*G 269
           +G RRPP    S+ +P  +     +  GR   RL+P ++  R   R +  R     WS G
Sbjct: 19  SGRRRPPRLAPSSRVPGPAVGAGRARRGRG-PRLVPQRMSCRG--RGAGGRWNSTSWSTG 75

Query: 270 CRSPSCTRIFHLHLP*GHPYLCFL 341
           C+ P+  R      P G   L FL
Sbjct: 76  CKLPASPRRVSRCSPTGLIKLAFL 99


>BC053367-1|AAH53367.1|  240|Homo sapiens GATS protein protein.
          Length = 240

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 26/84 (30%), Positives = 37/84 (44%)
 Frame = +3

Query: 90  NGLRRPPADTVSATIPRSSNSHPESITGRELRRLIPVQLRDRQWHRSSRTRLPQERWS*G 269
           +G RRPP    S+ +P  +     +  GR   RL+P ++  R   R +  R     WS G
Sbjct: 41  SGRRRPPRLAPSSRVPGPAVGAGRARRGRG-PRLVPQRMSCRG--RGAGGRWNSTSWSTG 97

Query: 270 CRSPSCTRIFHLHLP*GHPYLCFL 341
           C+ P+  R      P G   L FL
Sbjct: 98  CKLPASPRRVSRCSPTGLIKLAFL 121


>BC033723-1|AAH33723.1|  243|Homo sapiens GATS protein protein.
          Length = 243

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 26/84 (30%), Positives = 37/84 (44%)
 Frame = +3

Query: 90  NGLRRPPADTVSATIPRSSNSHPESITGRELRRLIPVQLRDRQWHRSSRTRLPQERWS*G 269
           +G RRPP    S+ +P  +     +  GR   RL+P ++  R   R +  R     WS G
Sbjct: 44  SGRRRPPRLAPSSGVPGPAVGAGRARRGRG-PRLVPQRMSCRG--RGAGGRWNSTSWSTG 100

Query: 270 CRSPSCTRIFHLHLP*GHPYLCFL 341
           C+ P+  R      P G   L FL
Sbjct: 101 CKLPASPRRVSRCSPTGLIKLAFL 124


>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
           protein.
          Length = 1537

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 298 FTYTSPEGIPIS--VSYVADEN--GFRPEGAHLPTPPPIPEAILRALQYIES 441
           FT T  E  P++  +   ADE+  G R E   +P PPP   A+ R  Q I S
Sbjct: 800 FTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPSSSAVFRLDQVIHS 851


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,626,248
Number of Sequences: 237096
Number of extensions: 1575432
Number of successful extensions: 5296
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5292
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)