Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0560
(854 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051790-1|AAK93214.1| 320|Drosophila melanogaster LD30634p pro... 82 8e-16
AE014297-894|AAF54350.1| 320|Drosophila melanogaster CG8444-PA ... 82 8e-16
AY119166-1|AAM51026.1| 610|Drosophila melanogaster RH29724p pro... 33 0.50
AY075263-1|AAL68130.1| 561|Drosophila melanogaster AT22518p pro... 33 0.50
AE014134-1164|AAN10599.1| 561|Drosophila melanogaster CG17378-P... 33 0.50
AE014134-1163|AAF52436.2| 610|Drosophila melanogaster CG17378-P... 33 0.50
BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p pro... 31 2.7
AF129433-1|AAD21090.1| 883|Drosophila melanogaster histone deac... 31 2.7
AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC... 31 2.7
AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB... 31 2.7
AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA... 31 2.7
>AY051790-1|AAK93214.1| 320|Drosophila melanogaster LD30634p
protein.
Length = 320
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 853 ADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN 701
+DY IFNIILWF VVF +L+AI YA+ MDPGRDSIIYRMT+TR+KKDN
Sbjct: 270 SDYPVIFNIILWFMVVFGLSLLAICYAIAAMDPGRDSIIYRMTSTRIKKDN 320
>AE014297-894|AAF54350.1| 320|Drosophila melanogaster CG8444-PA
protein.
Length = 320
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 853 ADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKKDN 701
+DY IFNIILWF VVF +L+AI YA+ MDPGRDSIIYRMT+TR+KKDN
Sbjct: 270 SDYPVIFNIILWFMVVFGLSLLAICYAIAAMDPGRDSIIYRMTSTRIKKDN 320
>AY119166-1|AAM51026.1| 610|Drosophila melanogaster RH29724p
protein.
Length = 610
Score = 33.1 bits (72), Expect = 0.50
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -1
Query: 713 EERQLNSSASALAD*NLVQYLFLYKFYGCSFCQKTHSISIVTF*ICFSFYNKLAFPRSGP 534
E+R + ++ +L QY F + CS C+ + + V +CF FY+++ P P
Sbjct: 363 EQRHKSKRLDSVTFGSLAQY-FALALFECSECED-YGPAAVLMNLCFLFYHEVEVPGCDP 420
Query: 533 TKKYYRFHDIARHEAW 486
++Y F + + W
Sbjct: 421 YREYL-FSSLRQQPIW 435
>AY075263-1|AAL68130.1| 561|Drosophila melanogaster AT22518p
protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.50
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -1
Query: 713 EERQLNSSASALAD*NLVQYLFLYKFYGCSFCQKTHSISIVTF*ICFSFYNKLAFPRSGP 534
E+R + ++ +L QY F + CS C+ + + V +CF FY+++ P P
Sbjct: 314 EQRHKSKRLDSVTFGSLAQY-FALALFECSECED-YGPAAVLMNLCFLFYHEVEVPGCDP 371
Query: 533 TKKYYRFHDIARHEAW 486
++Y F + + W
Sbjct: 372 YREYL-FSSLRQQPIW 386
>AE014134-1164|AAN10599.1| 561|Drosophila melanogaster CG17378-PB,
isoform B protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.50
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -1
Query: 713 EERQLNSSASALAD*NLVQYLFLYKFYGCSFCQKTHSISIVTF*ICFSFYNKLAFPRSGP 534
E+R + ++ +L QY F + CS C+ + + V +CF FY+++ P P
Sbjct: 314 EQRHKSKRLDSVTFGSLAQY-FALALFECSECED-YGPAAVLMNLCFLFYHEVEVPGCDP 371
Query: 533 TKKYYRFHDIARHEAW 486
++Y F + + W
Sbjct: 372 YREYL-FSSLRQQPIW 386
>AE014134-1163|AAF52436.2| 610|Drosophila melanogaster CG17378-PA,
isoform A protein.
Length = 610
Score = 33.1 bits (72), Expect = 0.50
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -1
Query: 713 EERQLNSSASALAD*NLVQYLFLYKFYGCSFCQKTHSISIVTF*ICFSFYNKLAFPRSGP 534
E+R + ++ +L QY F + CS C+ + + V +CF FY+++ P P
Sbjct: 363 EQRHKSKRLDSVTFGSLAQY-FALALFECSECED-YGPAAVLMNLCFLFYHEVEVPGCDP 420
Query: 533 TKKYYRFHDIARHEAW 486
++Y F + + W
Sbjct: 421 YREYL-FSSLRQQPIW 435
>BT004866-1|AAO45222.1| 1128|Drosophila melanogaster LD43531p
protein.
Length = 1128
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 103 LSTLSLPRAEFGTRITLCIRIDKLFWRDL----SYTCVKMNKKGVE 228
+ T+ LPRAE + CI + + WR L +Y CV++ + E
Sbjct: 432 VETVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKE 477
>AF129433-1|AAD21090.1| 883|Drosophila melanogaster histone
deacetylase HDA2 protein.
Length = 883
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 103 LSTLSLPRAEFGTRITLCIRIDKLFWRDL----SYTCVKMNKKGVE 228
+ T+ LPRAE + CI + + WR L +Y CV++ + E
Sbjct: 357 VETVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKE 402
>AE014298-2131|AAN09662.1| 1138|Drosophila melanogaster CG6170-PC,
isoform C protein.
Length = 1138
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 103 LSTLSLPRAEFGTRITLCIRIDKLFWRDL----SYTCVKMNKKGVE 228
+ T+ LPRAE + CI + + WR L +Y CV++ + E
Sbjct: 442 VETVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKE 487
>AE014298-2130|AAN09661.1| 1135|Drosophila melanogaster CG6170-PB,
isoform B protein.
Length = 1135
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 103 LSTLSLPRAEFGTRITLCIRIDKLFWRDL----SYTCVKMNKKGVE 228
+ T+ LPRAE + CI + + WR L +Y CV++ + E
Sbjct: 439 VETVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKE 484
>AE014298-2129|AAF48443.2| 1128|Drosophila melanogaster CG6170-PA,
isoform A protein.
Length = 1128
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 103 LSTLSLPRAEFGTRITLCIRIDKLFWRDL----SYTCVKMNKKGVE 228
+ T+ LPRAE + CI + + WR L +Y CV++ + E
Sbjct: 432 VETVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKE 477
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,760,539
Number of Sequences: 53049
Number of extensions: 782768
Number of successful extensions: 1596
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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