BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0559 (819 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 33 0.19 Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 1.3 Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 1.3 Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 31 1.3 AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 31 1.3 Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 4.0 U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical pr... 29 5.3 AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 29 5.3 Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical pr... 28 7.0 U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 9.2 U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 28 9.2 AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical... 28 9.2 >Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical protein C03E10.5 protein. Length = 623 Score = 33.5 bits (73), Expect = 0.19 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = +3 Query: 303 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 482 SST + S + + T++P T K T TS+PTS + T A ++ + Sbjct: 162 SSTASVSSTILSSTATTMVTSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPT 220 Query: 483 TT-CPTK*SELWSHPT 527 TT CPTK HPT Sbjct: 221 TTDCPTKVCRYGFHPT 236 >Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 511 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 335 NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537 Query: 334 TQKLFAAPVD 305 +L A P+D Sbjct: 1538 EVRL-AKPLD 1546 >Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 511 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 335 NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537 Query: 334 TQKLFAAPVD 305 +L A P+D Sbjct: 1538 EVRL-AKPLD 1546 >Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical protein F25F2.2 protein. Length = 4307 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 511 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 335 NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537 Query: 334 TQKLFAAPVD 305 +L A P+D Sbjct: 1538 EVRL-AKPLD 1546 >AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical protein Y38H6C.17 protein. Length = 454 Score = 30.7 bits (66), Expect = 1.3 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -1 Query: 615 ELVYSLWMFMIGQPPPFLARLILYSLFMP 529 E + +W F+ G PPPF +++ F+P Sbjct: 151 EHIIEIWQFIAGSPPPFSKIVLILMYFVP 179 >Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical protein C30H6.11 protein. Length = 460 Score = 29.1 bits (62), Expect = 4.0 Identities = 21/63 (33%), Positives = 29/63 (46%) Frame = +3 Query: 360 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 539 T +P TT T T++PT+ APT T++ T TT T + + PT T Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTT--TPTTTTTVPTTTTTTPTTTTT 229 Query: 540 TNT 548 T T Sbjct: 230 TTT 232 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/63 (33%), Positives = 30/63 (47%) Frame = +3 Query: 360 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 539 T +P TT T T++PT+ PT T+ + T TT PT ++ + PT T Sbjct: 221 TTTPTTTT----TTTTTPTTTTTTPTTTTTPATTT--SETTTTTPTTTTQTTTKPTTTTT 274 Query: 540 TNT 548 T T Sbjct: 275 TPT 277 >U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical protein C50E3.3 protein. Length = 128 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -2 Query: 434 WGVWV*GWRRGTRPSPLGRLQWGSCPQQNGSKFHAKTLCRSS 309 WGVW GTR + G + C G KF+ KTL S Sbjct: 24 WGVWF----DGTRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61 >AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical protein F56D6.15 protein. Length = 395 Score = 28.7 bits (61), Expect = 5.3 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +3 Query: 384 KR*WTCTSSPTSNPHA--PTGATSSSLNTLLGGKKT 485 K + C+ PT P A PT T++++N LGG++T Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148 >Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical protein T07C12.14 protein. Length = 215 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = +2 Query: 149 KHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVK 283 +HL + E E K+ D+L ++AE ++ + F+E R K Sbjct: 35 EHLTQEEYERKKTDILRRAVLAESQYIALRTQLRDNKFREAREYK 79 >U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein K06A9.1b protein. Length = 2232 Score = 27.9 bits (59), Expect = 9.2 Identities = 26/75 (34%), Positives = 36/75 (48%) Frame = +3 Query: 303 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 482 S++G S L + + T SP +T+ T TS P+S+P T + SSS T + Sbjct: 1960 STSGTNPSSPRSLSQITI-TPSPSQSTES--TQTSLPSSSPSPSTHSVSSSEGTTMSSGA 2016 Query: 483 TTCPTK*SELWSHPT 527 TT K S L S T Sbjct: 2017 TTSGDKMSFLSSTGT 2031 >U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical protein F37A4.4 protein. Length = 1163 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -1 Query: 633 FTNDSNELVYSLWMFMIGQPPPFLARLILYSLFMPT*DGSTILITS 496 FT++ +L+++ G+ + R YSLFM DG +LI S Sbjct: 787 FTSNGRNQYINLYLYYFGKTSDYEKRW-RYSLFMDRVDGKNVLIDS 831 >AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical protein Y39A1A.22 protein. Length = 710 Score = 27.9 bits (59), Expect = 9.2 Identities = 23/106 (21%), Positives = 44/106 (41%) Frame = +2 Query: 146 KKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLIVNWSGKE 325 +K E +QE + +L + +AE +L +FK++ + DT + + GK+ Sbjct: 52 EKFFNECDQELTKINLFFSQKIAEGQGKHHELQTELQVFKDVLGSRSDTTGIRRRFGGKD 111 Query: 326 FLRETWTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQH 463 + TR E + + + + LV N + K L +H Sbjct: 112 KFHKETTR-NEQQLKLAFSEFYLSLVLVQNFQQLNATGFRKILKKH 156 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,724,851 Number of Sequences: 27780 Number of extensions: 441197 Number of successful extensions: 1283 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1276 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2019417216 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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