Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0556
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 72 5e-13
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_23689| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 51 1e-06
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_27272| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 48 1e-05
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 45 8e-05
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_18857| Best HMM Match : Gln-synt_N (HMM E-Value=1.5) 42 8e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_18772| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 32 0.47
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27) 30 2.5
SB_39247| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.4
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 271 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 51 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 91
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 271 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 51 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 91
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 271 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 80 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 119
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 130 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 170
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 61.3 bits (142), Expect = 9e-10
Identities = 50/121 (41%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +2
Query: 215 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQP*KWMALKRFAYTLPLP 394
++ +RS D KGVG S QQDGGHGS NPL+ C + K +ALK
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLKE-----CVTTPLPKQLALKMDG----AQ 59
Query: 395 ARVMLNF*FGIIKP*RV-GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEG 571
A + K RV GR R A G + +S ADLGGSSKYS+E+ ED GE
Sbjct: 60 ASHLYRAVGADAKLRRVGGRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGER 117
Query: 572 F 574
F
Sbjct: 118 F 118
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1
Query: 307 KECATTHLPKQPALKMDGAEAFCLYTTV 390
KEC TT LPKQ ALKMDGA+A LY V
Sbjct: 40 KECVTTPLPKQLALKMDGAQASHLYRAV 67
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 59.7 bits (138), Expect = 3e-09
Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +2
Query: 215 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQP*KWMALKRFAYTLPLP 394
++ +RS D KGVG S QQDGGHGS NP + C + K +ALK
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPAKE-----CVTTHLPKQLALKMDG----AQ 59
Query: 395 ARVMLNF*FGIIKP*RV-GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEG 571
A + K RV GR R A G + +S ADLGGSSKYS+E+ ED GE
Sbjct: 60 ASHLYRAVGADAKLRRVGGRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGER 117
Query: 572 F 574
F
Sbjct: 118 F 118
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1
Query: 304 AKECATTHLPKQPALKMDGAEAFCLYTTV 390
AKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 39 AKECVTTHLPKQLALKMDGAQASHLYRAV 67
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 271 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
TAGR + ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRVAMEVESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 51 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 91
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 54.4 bits (125), Expect = 1e-07
Identities = 38/82 (46%), Positives = 42/82 (51%)
Frame = -2
Query: 379 IGKTLQRHPFSGLVASAGESLHTP*RIPTSMATVLLS*ATNAFHGVP*AFFRRLNTTFGS 200
IG TL+RHPFSGLVASA + TP F G LN FGS
Sbjct: 24 IGATLERHPFSGLVASAEQP--TP------------------FVGSDERRLWHLNRAFGS 63
Query: 199 SHSASSAYQNWPTWHRHQISGF 134
S ASSAYQ WPT + H +SGF
Sbjct: 64 SRIASSAYQKWPTRNSHSLSGF 85
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 54.4 bits (125), Expect = 1e-07
Identities = 38/82 (46%), Positives = 42/82 (51%)
Frame = -2
Query: 379 IGKTLQRHPFSGLVASAGESLHTP*RIPTSMATVLLS*ATNAFHGVP*AFFRRLNTTFGS 200
IG TL+RHPFSGLVASA + TP F G LN FGS
Sbjct: 22 IGATLERHPFSGLVASAEQP--TP------------------FVGSDERRLWHLNRAFGS 61
Query: 199 SHSASSAYQNWPTWHRHQISGF 134
S ASSAYQ WPT + H +SGF
Sbjct: 62 SRIASSAYQKWPTSNSHSLSGF 83
>SB_23689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 589 TTVHAKPFSTSVLQGLAGVFATTTKICTDGGSKRAHAQTLLRSPSRTSYSLRL 431
T VH +PFSTSV + L +FATTTKICT G +A A+ + +P+ SYS L
Sbjct: 113 TAVHMEPFSTSVFKALIRIFATTTKICTGGRFTQARARGCVTTPT-PSYSSEL 164
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1
Query: 292 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 9 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 41
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 7/48 (14%)
Frame = +2
Query: 452 ARRRAQKGLGV--SPLGASVG-----ADLGGSSKYSSEALED*RGEGF 574
A+ R GLGV + GAS+G ADLGGSSKYS+E+ ED GE F
Sbjct: 45 AKLRRVGGLGVRDAASGASLGETASSADLGGSSKYSNESFEDRSGERF 92
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1
Query: 292 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1
Query: 292 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Frame = +2
Query: 449 RARRRAQKGLGVSPLGASVG-----ADLGGSSKYSSEALED*RGEGF 574
+ RR +G+ + GAS+G ADLGGSSKYS+E+ ED GE F
Sbjct: 39 KLRRVGGRGVRDAASGASLGETASSADLGGSSKYSNESFEDRSGERF 85
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 298 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 390
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 10 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 51 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 91
>SB_27272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 609 DRLTREQLLFTRNPSPRQSSRASLEYLLLPPRSA 508
DRLT QLLFT N SP +SS+ S EYLLLPPRSA
Sbjct: 89 DRLTHVQLLFTWNLSPLRSSKLSFEYLLLPPRSA 122
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGFIVRVSRSSHPFKV 95
LN FGSS ASSAYQ WPT + H +SGF SR+S+ FKV
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 301 SAKECATTHLPKQPALKMDGAEAFCLYTTV 390
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 301 SAKECATTHLPKQPALKMDGAEAFCLYTTV 390
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 301 SAKECATTHLPKQPALKMDGAEAFCLYTTV 390
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 301 SAKECATTHLPKQPALKMDGAEAFCLYTTV 390
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 446 GRARRRAQKGLGVSPLGASVGADLGGSSKYSSEALED*RGEGF 574
GR R A G + +S ADLGGSSKYS+E+ ED GE F
Sbjct: 45 GRGGRDAASGASLGETASS--ADLGGSSKYSNESFEDRSGERF 85
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2
Query: 215 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRL 325
++ +RS D KGVG S QQDGGHGS NPLR QRL
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQRL 45
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 54 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 82
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 55 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 83
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTKNSHSLSGF 45
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 96 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 124
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 139 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 167
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNHAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN +GSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAYGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSA Q WPT + H +SGF
Sbjct: 74 LNRAFGSSRIASSALQKWPTRNSHSLSGF 102
>SB_18857| Best HMM Match : Gln-synt_N (HMM E-Value=1.5)
Length = 164
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -2
Query: 589 TTVHAKPFSTSVLQGLAGVFATTTKICTDGGSKRAHAQTLLRSPS 455
T VH PFSTS Q L +FATTTKIC G + + + +P+
Sbjct: 48 TAVHMDPFSTSGFQALILIFATTTKICPGGRFTQGSGKGWVTTPT 92
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3
Query: 231 NAHGTP*KALVAHDSRTVAMEVGIR 305
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 292 KSESAKECATTHLPKQPALKM 354
K ESAKEC TTHLPKQ ALKM
Sbjct: 2 KVESAKECVTTHLPKQLALKM 22
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQISGF 134
LN FGSS ASSAYQ PT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKGPTRNSHSLSGF 45
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPTWHRHQI 143
LN FGSS ASSAYQ WPT + H +
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSL 42
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 35.5 bits (78), Expect = 0.051
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWPT 161
LN FGSS ASSAYQ WPT
Sbjct: 17 LNRAFGSSRIASSAYQKWPT 36
>SB_18772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 486 ARLEPPSVQILVVVANTPARPWRTDVEKG 572
A ++ P VQILVVVAN R +T+VEKG
Sbjct: 34 AWVKRPPVQILVVVANIQMRALKTEVEKG 62
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 32.3 bits (70), Expect = 0.47
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = -3
Query: 267 ERPTPFMVSHERFLGALTLRLVHPTAPVLLTKI-------GPLGTVIRSPASSFE*AGVL 109
E+PTPF+ S ER RL HP ++I GP T I P + + G+L
Sbjct: 58 EQPTPFVGSDER-------RLWHPYRAFGSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLL 109
Query: 108 THLKFENR 85
T+LKFENR
Sbjct: 110 TNLKFENR 117
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -2
Query: 208 FGSSHSASSAYQNWPTWHRHQISGF 134
FGSS ASS YQN PT R GF
Sbjct: 78 FGSSRIASSGYQNGPTRTRIHCPGF 102
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2
Query: 220 LNTTFGSSHSASSAYQNWP 164
LN FGSS ASSAYQN P
Sbjct: 17 LNRAFGSSRIASSAYQNGP 35
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3
Query: 264 RPTPFMVSHERFLGALTLRLVHPTAPVLLTKIGPLGTVIRSPAS 133
+PTPF+ S ER L L + GPLGT I PAS
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27)
Length = 770
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -2
Query: 580 HAKPFSTSVLQGLAGVFATTTKICTDGGSKRAHAQTLLRSPSRTSYSLRLN 428
HA F V GL G+ AT +I T GS R ++ P RTS L N
Sbjct: 410 HATTFLVVVGHGLPGIQATRPRIKTTAGS-RCVLNCIVTLPPRTSVILSWN 459
>SB_39247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 662 KNYKKTRHIDIRSLLELRID*LASNYCSRETLLHVSPPGPRWS 534
+N K RH+ + D L+SN CS L + P PRWS
Sbjct: 2 ENNKTVRHLGRHFTGHAKNDALSSNSCSPGDPLVLERPPPRWS 44
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 323 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 228
+ H + ++DF G R A+M+D +L C S+F
Sbjct: 386 LTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,331,265
Number of Sequences: 59808
Number of extensions: 577628
Number of successful extensions: 2303
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2302
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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