Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0556
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ118267-1|AAZ94749.1| 79|Homo sapiens immunoglobulin heavy ch... 33 1.6
AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA seq... 33 1.6
AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA seq... 33 1.6
AF471330-1|AAQ05505.1| 127|Homo sapiens Ig heavy chain variable... 31 3.7
AF282168-1|AAG03039.1| 437|Homo sapiens DRC3 protein. 31 4.8
AF282167-1|AAG03038.1| 437|Homo sapiens DRC3 protein. 31 4.8
DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta... 30 8.5
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4... 30 8.5
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4... 30 8.5
AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein pr... 30 8.5
>DQ118267-1|AAZ94749.1| 79|Homo sapiens immunoglobulin heavy chain
VDJ region protein.
Length = 79
Score = 32.7 bits (71), Expect = 1.6
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 728 LPGSGIGTGFPFAQRALFFIIFKNYKKTRHIDIRSLLELRID*LASNYCSRETLLHV 558
+ GSG T + + F I N K T H+ + SL R++ A YCS+++ +HV
Sbjct: 15 ISGSGDSTYYTNLAKGRFXISRDNSKNTVHLQMNSL---RVEDTAIYYCSKDSGMHV 68
>AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-71D21 on chromosome 6. ).
Length = 366
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -3
Query: 564 PRQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYG 433
PR +SR + Y+ R+ P SG TP P C R RP R G
Sbjct: 65 PRGASRRQVTYVRSGRRAPPGGGGSG-TPEPGCCAPRGRPRRKG 107
>AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-261K5 on chromosome 6q21-22.1
Contains the 3' end of the SLC22A16 gene for solute
carrier family ).
Length = 366
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -3
Query: 564 PRQSSRASLEYLLLPPRSAPTEAPSGLTPRPFCALRRARPTRYG 433
PR +SR + Y+ R+ P SG TP P C R RP R G
Sbjct: 65 PRGASRRQVTYVRSGRRAPPGGGGSG-TPEPGCCAPRGRPRRKG 107
>AF471330-1|AAQ05505.1| 127|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 127
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -1
Query: 728 LPGSGIGTGFPFAQRALFFIIFKNYKKTRHIDIRSLLELRID*LASNYCSRETLLHVSPP 549
+ GSG T + + + F I N K T ++ + SL R + +C++ VS P
Sbjct: 51 ISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSL---RAEDTGVYFCAKGL---VSTP 104
Query: 548 GPRWSICYYHQDL 510
GPRW YY D+
Sbjct: 105 GPRW-YYYYAMDV 116
>AF282168-1|AAG03039.1| 437|Homo sapiens DRC3 protein.
Length = 437
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 606 RLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGLTPRPF 469
R R++ ++ P+PR S A PPRSAP P L P P+
Sbjct: 390 RAARDRAAQSQGPAPRNRSSARAR---TPPRSAPGCRPRALAPGPW 432
>AF282167-1|AAG03038.1| 437|Homo sapiens DRC3 protein.
Length = 437
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 606 RLTREQLLFTRNPSPRQSSRASLEYLLLPPRSAPTEAPSGLTPRPF 469
R R++ ++ P+PR S A PPRSAP P L P P+
Sbjct: 390 RAARDRAAQSQGPAPRNRSSARAR---TPPRSAPGCRPRALAPGPW 432
>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
containing 4 protein.
Length = 1048
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 161 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 256
+GP+LV G T +++KAP SW+T+ G
Sbjct: 246 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 276
>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 161 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 256
+GP+LV G T +++KAP SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277
>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 161 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 256
+GP+LV G T +++KAP SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277
>AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein
protein.
Length = 319
Score = 30.3 bits (65), Expect = 8.5
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 567 SPRQSSRASLEYLLLPPRSAPTEAPS--GLTPRPFCALRRARPTRYGLMIPN*KFSITR 397
SP RAS PPR++PT PS LT P A P+R LM SITR
Sbjct: 11 SPMTPPRASPR---TPPRASPTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITR 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,289,769
Number of Sequences: 237096
Number of extensions: 2876937
Number of successful extensions: 8255
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8237
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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