Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0555
(677 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 332 3e-90
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 286 3e-76
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 263 3e-69
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 250 2e-65
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 247 2e-64
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 224 1e-57
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 206 4e-52
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 197 2e-49
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 172 8e-42
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 144 2e-33
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 139 7e-32
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 135 8e-31
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 132 6e-30
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 132 6e-30
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 131 2e-29
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 131 2e-29
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 130 4e-29
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 129 7e-29
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 128 9e-29
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 126 4e-28
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 125 9e-28
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 125 1e-27
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 122 8e-27
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 121 2e-26
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 120 4e-26
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 119 6e-26
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 119 8e-26
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 112 7e-24
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 103 3e-21
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 102 7e-21
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 102 9e-21
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 100 6e-20
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 95 1e-18
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 87 3e-16
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 87 4e-16
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 83 6e-15
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 83 6e-15
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 80 4e-14
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 79 1e-13
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 78 2e-13
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 77 3e-13
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 76 9e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 2e-12
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 74 3e-12
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 73 5e-12
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 73 6e-12
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 73 9e-12
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 72 1e-11
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 72 1e-11
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 71 2e-11
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 70 5e-11
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 68 2e-10
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 67 4e-10
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 66 1e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 64 4e-09
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 63 5e-09
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 63 5e-09
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 63 7e-09
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 62 9e-09
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 62 1e-08
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 62 2e-08
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 61 2e-08
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 61 3e-08
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 60 5e-08
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 59 1e-07
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 58 1e-07
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 58 2e-07
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 57 3e-07
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 56 8e-07
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 55 1e-06
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 54 2e-06
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 6e-06
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 52 1e-05
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 48 2e-04
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 47 4e-04
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 47 5e-04
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 46 0.001
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 45 0.001
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 39 0.097
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 39 0.097
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.39
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.69
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 35 1.6
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.1
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.1
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 4.8
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 6.4
UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;... 33 6.4
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.4
UniRef50_A3LRX8 Cluster: Predicted protein; n=6; Saccharomycetal... 33 6.4
UniRef50_Q890Q2 Cluster: Ribosomal protein; n=1; Clostridium tet... 33 8.4
UniRef50_A7PJH9 Cluster: Chromosome chr12 scaffold_18, whole gen... 33 8.4
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 332 bits (817), Expect = 3e-90
Identities = 159/196 (81%), Positives = 166/196 (84%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV V
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLV 193
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTP 137
RLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LGNF YLTP
Sbjct: 194 RLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTP 253
Query: 136 DLWRDIPLTKSPYSEF 89
DLW++ TKSPY EF
Sbjct: 254 DLWKETVFTKSPYQEF 269
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 286 bits (702), Expect = 3e-76
Identities = 126/196 (64%), Positives = 159/196 (81%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTV
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTV 166
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTP 137
RL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST LGNF LTP
Sbjct: 167 RLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVKAAFAAASLTYGILTP 226
Query: 136 DLWRDIPLTKSPYSEF 89
+LW + P ++P E+
Sbjct: 227 NLWAERPFGQTPIEEY 242
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 263 bits (644), Expect = 3e-69
Identities = 126/166 (75%), Positives = 135/166 (81%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 226 TSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 89
TSAR T LGNF YLTPDLW++ TKSPY EF
Sbjct: 168 TSARDCTASLGNFAKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 250 bits (613), Expect = 2e-65
Identities = 119/196 (60%), Positives = 144/196 (73%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD
Sbjct: 64 KIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDC 123
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PHT+P KV GKCGSV V
Sbjct: 124 NGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHV 183
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTP 137
RLIPAPRG GIV++ KK+L MAG+ D YT +RG T LGN +LTP
Sbjct: 184 RLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGNSVKATYEALKNSYGFLTP 243
Query: 136 DLWRDIPLTKSPYSEF 89
DLW + K P EF
Sbjct: 244 DLWAETRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 247 bits (604), Expect = 2e-64
Identities = 117/192 (60%), Positives = 143/192 (74%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+
Sbjct: 49 KITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDS 107
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G+PH++ K TGKCGSVTV
Sbjct: 108 NGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTV 167
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTP 137
RLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T L N +LTP
Sbjct: 168 RLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTP 227
Query: 136 DLWRDIPLTKSP 101
+LW + PL SP
Sbjct: 228 NLWAEQPLPVSP 239
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 224 bits (548), Expect = 1e-57
Identities = 107/126 (84%), Positives = 111/126 (88%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTVPCKVTG+C SV V
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLV 133
Query: 316 RLIPAP 299
LIPAP
Sbjct: 134 HLIPAP 139
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 206 bits (503), Expect = 4e-52
Identities = 99/196 (50%), Positives = 126/196 (64%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE I+ FS I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD
Sbjct: 35 KITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDR 94
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
GH+G+G K SKE A+AIRGAI AK ++ PVR G W GKPHTV CK +GKCG+ V
Sbjct: 95 KGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVV 154
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTP 137
++IPAPRGTGI+S V KK+ ++AG++D YT + G+T NF + P
Sbjct: 155 QVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTENFAKASIAALEATSSMILP 214
Query: 136 DLWRDIPLTKSPYSEF 89
D W + P T +P EF
Sbjct: 215 DQWEEKPRTLNPLLEF 230
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 197 bits (481), Expect = 2e-49
Identities = 91/114 (79%), Positives = 99/114 (86%)
Frame = -2
Query: 535 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 356
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 355 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLG 194
P KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T G
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 172 bits (418), Expect = 8e-42
Identities = 95/155 (61%), Positives = 110/155 (70%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
+I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD
Sbjct: 62 EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDY 115
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV CKVTG GSV++
Sbjct: 116 NGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GSVSL 171
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 212
LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 172 HLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 144 bits (349), Expect = 2e-33
Identities = 92/198 (46%), Positives = 113/198 (57%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE IY FSL + + F P+ KQT Q+TRFKA V +G +
Sbjct: 68 KIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQTCTDQQTRFKASVTVG-S 116
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV 317
GH+ LG+K S EVA IILAKLS++PV G ++ +PH VPC+VTG+CGS+ V
Sbjct: 117 YGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLV 169
Query: 316 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTP 137
LIPAPRGTG VSAPVP KLL MAG+ D +SA G T LGNF YL P
Sbjct: 170 HLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNFTKAIFDTISKTHSYLIP 227
Query: 136 DLWRDIPLTKSPYSEFKV 83
DL ++ KS Y +V
Sbjct: 228 DLQKETVFAKSLYQNSRV 245
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 139 bits (336), Expect = 7e-32
Identities = 72/165 (43%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI ++ ++ +LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+
Sbjct: 27 KISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNM 85
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSV 323
+G++ +G +K++ AI+ AI AK++++PVRRG W G+PH++P KV GK GSV
Sbjct: 86 DGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSV 145
Query: 322 TVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
V L+PAP+GTG+V V K LL AG++D +++ +G T NF
Sbjct: 146 EVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENF 190
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 135 bits (327), Expect = 8e-31
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Frame = -2
Query: 640 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 461
LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SK
Sbjct: 42 LPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSK 100
Query: 460 EVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTG 287
EV AIR AI AKLS++ VR G W G PH++P G CGSV V L+PAPRG G
Sbjct: 101 EVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVG 160
Query: 286 IVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
+V+ V K +L +AGV+D +T G T NF
Sbjct: 161 LVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 132 bits (320), Expect = 6e-30
Identities = 90/186 (48%), Positives = 106/186 (56%)
Frame = -2
Query: 646 FSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 467
FSL K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KC
Sbjct: 83 FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKC 138
Query: 466 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTG 287
SK+ ATAI VL V +G ++G TV CKVTG+C SV + LIP R
Sbjct: 139 SKKTATAI----------VL-VWKGTRETRLGSL-TVSCKVTGQCVSVLICLIPPTRN-- 184
Query: 286 IVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 107
I+SAPVPKKLL +A + DCYTSARG T L NF YLTP+LW+ + K
Sbjct: 185 IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDKATFNAISNTYSYLTPNLWKGLVFAK 244
Query: 106 SPYSEF 89
S Y EF
Sbjct: 245 STYLEF 250
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 132 bits (320), Expect = 6e-30
Identities = 79/163 (48%), Positives = 96/163 (58%)
Frame = -2
Query: 613 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 434
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 433 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 254
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 253 QMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLWR 125
+MA + D + ARG T L N LT D WR
Sbjct: 115 RMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFWR 156
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 131 bits (316), Expect = 2e-29
Identities = 72/159 (45%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
+I LE I L I+E II L P L EV+ + +QK T GQ TRFKA VA G+
Sbjct: 60 EISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNE 118
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSV 323
NG++G+G SK++ AI A A L+V P++ G W + + H+VP KV GK GSV
Sbjct: 119 NGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSV 178
Query: 322 TVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
T+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST
Sbjct: 179 TIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGST 217
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 131 bits (316), Expect = 2e-29
Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 6/169 (3%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVA 509
+I + I+ IKE EIID L P +N EVL I + T +G+R RF+ A
Sbjct: 30 QITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAA 88
Query: 508 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGK 335
+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG W + +PH+VP V GK
Sbjct: 89 VGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGK 148
Query: 334 CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T NF
Sbjct: 149 EGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNF 197
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 130 bits (313), Expect = 4e-29
Identities = 62/179 (34%), Positives = 107/179 (59%)
Frame = -2
Query: 664 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 485
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 484 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 305
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 304 APRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLW 128
AP+GTGIV++ +L+++G++DC+T + G T N ++TPD W
Sbjct: 204 APKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 129 bits (311), Expect = 7e-29
Identities = 67/165 (40%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+
Sbjct: 21 EIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNR 79
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSV 323
+G IG +V AI+ AI +AKL+++ V RG W G+PHTV + GK GSV
Sbjct: 80 DGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSV 139
Query: 322 TVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
V L PAPRG G+ +K+L++AG++D +T + G+T NF
Sbjct: 140 EVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 128 bits (310), Expect = 9e-29
Identities = 64/153 (41%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Frame = -2
Query: 640 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 461
LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +K
Sbjct: 31 LPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAK 89
Query: 460 EVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTG 287
E A AI+ AI AKL+++ ++RG W GKPHT+P V GK GSV+V L PAP+G G
Sbjct: 90 EAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVG 149
Query: 286 IVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
+ V K +L+MAG+ D + A G T N+
Sbjct: 150 LAVGDVVKVILRMAGIDDAWGFAAGHTKTTVNY 182
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 126 bits (305), Expect = 4e-28
Identities = 60/87 (68%), Positives = 64/87 (73%)
Frame = -2
Query: 349 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXX 170
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LGNF
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 169 XXXXXXXYLTPDLWRDIPLTKSPYSEF 89
YLTPDLW++ TKSPY EF
Sbjct: 185 AISKTYSYLTPDLWKETVFTKSPYQEF 211
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 521
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 125 bits (302), Expect = 9e-28
Identities = 66/165 (40%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G++
Sbjct: 6 KILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNS 64
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTGKCGSV 323
+G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG+ GS
Sbjct: 65 DGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITGRSGST 124
Query: 322 TVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
V L+PAP G G+V + +++L +AGV D ++ + G T N+
Sbjct: 125 RVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 125 bits (301), Expect = 1e-27
Identities = 86/190 (45%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Frame = -2
Query: 664 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 485
++ I + LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH
Sbjct: 10 VKDIKIKYLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHN 67
Query: 484 GLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLI 308
G+GVKCSK+V TA+ + + L S LP R Y GN I KP T PCK TG S++ L
Sbjct: 68 GIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-TYPCKRTG--WSISF-LF 121
Query: 307 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLW 128
P IVS VP+KL+ A + CYTSAR T LGN TP+LW
Sbjct: 122 PETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLW 179
Query: 127 RDIPLTKSPY 98
++ TKSPY
Sbjct: 180 KEAVFTKSPY 189
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 122 bits (294), Expect = 8e-27
Identities = 68/159 (42%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
+I LE I I+E II L P L EV+ + +QK T GQ TRFKA VA G+
Sbjct: 41 EITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNE 99
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSV 323
NG++G+G +K++ AI A A L+V P++ G W + + H+VP KV GK GSV
Sbjct: 100 NGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSV 159
Query: 322 TVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
+ ++PAPRG G+V+ ++LL++AG++D YT+A+GST
Sbjct: 160 VIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGST 198
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 121 bits (291), Expect = 2e-26
Identities = 63/158 (39%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Frame = -2
Query: 673 IDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNN 494
I +E LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +
Sbjct: 73 ISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRD 131
Query: 493 GHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTGKCGSVT 320
G++G +V AI+ AI +AKL+++ V R G W ++ G +++ K GK GSVT
Sbjct: 132 GYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVT 191
Query: 319 VRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
V + PAP+G G+ +A + +L++AGV+D +T++ G+T
Sbjct: 192 VEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNT 229
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 120 bits (288), Expect = 4e-26
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 496 NGHIGL 479
NGH+GL
Sbjct: 109 NGHVGL 114
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 119 bits (287), Expect = 6e-26
Identities = 71/183 (38%), Positives = 108/183 (59%)
Frame = +2
Query: 101 WRLSQRDVPPQVRSEVGICLGNGSICGFSKISQGAS*TTS*GVAVLYTSHLKKLLRNWRR 280
W SQ PQV S+ + + +G+ G + Q + T+ GV + TS L +LL +W
Sbjct: 18 WGRSQSLDFPQVWSQETVGVTDGNESGLQSVFQSSGGTSRRGVDIFNTSQLHQLLDSWGG 77
Query: 281 HNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDF 460
++ T+ NQ + TTL L GV L+ + TPVTSS+W N QL D++ S+G+ +F
Sbjct: 78 DDTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNF 137
Query: 461 LAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW* 640
L+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW
Sbjct: 138 LSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQ 196
Query: 641 RKQ 649
R Q
Sbjct: 197 RVQ 199
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 119 bits (286), Expect = 8e-26
Identities = 64/124 (51%), Positives = 76/124 (61%)
Frame = -2
Query: 559 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 380
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------T 51
Query: 379 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGP 200
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 199 LGNF 188
L NF
Sbjct: 112 LYNF 115
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 112 bits (270), Expect = 7e-24
Identities = 56/87 (64%), Positives = 60/87 (68%)
Frame = -2
Query: 349 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXX 170
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T LGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 169 XXXXXXXYLTPDLWRDIPLTKSPYSEF 89
YLTPDLW++ TKSPY EF
Sbjct: 184 AISKIYSYLTPDLWKETVFTKSPYQEF 210
Score = 83.8 bits (198), Expect = 3e-15
Identities = 42/52 (80%), Positives = 43/52 (82%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 521
KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 496 NGHIG 482
NG+ G
Sbjct: 62 NGYAG 66
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = -1
Query: 503 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 324
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 323 NSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWPLGKFC*SHI-CC 168
+W+ + + + EA+ D W LLHLS + G+ H+ CC
Sbjct: 119 AGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHLGCC 171
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 103 bits (248), Expect = 3e-21
Identities = 67/145 (46%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Frame = -2
Query: 670 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNG 491
+K++S+ S P +II+FFLG L DEVL+ M Q Q RTR K F + +
Sbjct: 36 EKIKSLESCS-PFSSSDIIEFFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIRSP 89
Query: 490 HIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTG-KCGSVTVR 314
L V CSKEV TA + AI L + + GY GNKIG PHT+PC VT + V V
Sbjct: 90 MTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVC 147
Query: 313 LIPAPRGTGIVSAPVPKKLLQMAGV 239
L APRGTG VSA VPKKL +A +
Sbjct: 148 LTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 102 bits (245), Expect = 7e-21
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 15/172 (8%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV-------------QKQTRAGQ 536
KI ++ I I+E EI+D L P+L E +K + QK+T G
Sbjct: 21 KITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGN 79
Query: 535 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPH 362
+TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG W G PH
Sbjct: 80 KTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSWECACGAPH 139
Query: 361 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T
Sbjct: 140 SIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKT 191
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 102 bits (244), Expect = 9e-21
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -2
Query: 307 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLW 128
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LGNF YLTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 127 RDIPLTKSPYSEF 89
++ TKSPY EF
Sbjct: 61 KETVFTKSPYQEF 73
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 99.5 bits (237), Expect = 6e-20
Identities = 48/66 (72%), Positives = 49/66 (74%)
Frame = -2
Query: 385 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 205 GPLGNF 188
L F
Sbjct: 67 ASLDYF 72
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 96.7 bits (230), Expect = 5e-19
Identities = 52/110 (47%), Positives = 74/110 (67%)
Frame = +2
Query: 344 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 523
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 524 ETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVD 673
E L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGAD 127
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD+
Sbjct: 78 KIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDS 136
Query: 496 NGHIGLGVKCSKEVATAIR 440
+ HIGLG K +KEV AI+
Sbjct: 137 HQHIGLGWKSAKEVQGAIQ 155
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/109 (29%), Positives = 47/109 (43%)
Frame = -1
Query: 407 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLL 228
+S KR+LG QDR TH P+Q R+ S S YW E ++GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 227 HLSSWFNWPLGKFC*SHICCHCQDICLPHS*LVEGHPAD*VSILRVQSL 81
H K S++ C +++ P+ + H +ILR Q +
Sbjct: 229 HSIQRKYKNQIKLLESNLPCPQRNLQFPNPRSLGTHQIRINTILRTQRI 277
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/133 (35%), Positives = 76/133 (57%)
Frame = -2
Query: 595 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 416
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 415 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 236
+++ V++ K ++ V G+ G+ V L+PAP GTGI++ + ++++AG
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 235 DCYTSARGSTGPL 197
D YT +RG+ P+
Sbjct: 161 DIYTKSRGANAPM 173
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -2
Query: 655 IYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 476
+YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LG
Sbjct: 142 VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLG 201
Query: 475 VKCSKEVATAIRGAIILAKLSV 410
V+ KE+ A+ +L+ + V
Sbjct: 202 VEWPKELLIAVCRTNVLSIILV 223
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 83.0 bits (196), Expect = 6e-15
Identities = 47/132 (35%), Positives = 75/132 (56%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
++ V +G T+P ++ G+ GS V + PA GTG++S + +L++AGV D
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 232 CYTSARGSTGPL 197
T + GS P+
Sbjct: 124 ILTKSLGSNTPI 135
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/126 (34%), Positives = 71/126 (56%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
+ K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 226 TSARGS 209
T +GS
Sbjct: 123 TKIKGS 128
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 80.2 bits (189), Expect = 4e-14
Identities = 44/137 (32%), Positives = 75/137 (54%)
Frame = -2
Query: 601 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 422
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 421 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 242
K + + V I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 241 VQDCYTSARGSTGPLGN 191
Q+ G+ L N
Sbjct: 181 YQNARGKQLGTDNALNN 197
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/131 (34%), Positives = 72/131 (54%)
Frame = -2
Query: 589 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 410
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 409 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 230
+ + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 229 YTSARGSTGPL 197
T + GS+ P+
Sbjct: 143 LTKSWGSSNPV 153
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 410
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 409 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+PV G T+P +V G+ + V L PA GTGI++ + ++++AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 232 CYTSARGSTGPL 197
T + GST PL
Sbjct: 127 ILTKSLGSTNPL 138
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 77.4 bits (182), Expect = 3e-13
Identities = 44/132 (33%), Positives = 72/132 (54%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+ V K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKD 190
Query: 232 CYTSARGSTGPL 197
Y+ G L
Sbjct: 191 VYSKNLGKNTSL 202
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 75.8 bits (178), Expect = 9e-13
Identities = 37/132 (28%), Positives = 75/132 (56%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V + K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 226 TSARGSTGPLGN 191
+ GS PL N
Sbjct: 181 AKSLGSKSPLNN 192
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 496 NGHIGLGVKCSKEVATAIRGAIIL 425
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 74.1 bits (174), Expect = 3e-12
Identities = 43/137 (31%), Positives = 71/137 (51%)
Frame = -2
Query: 607 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 428
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 427 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 248
AK +++ V + TVP +V G G+ V + PA GTG+++ + ++++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 247 AGVQDCYTSARGSTGPL 197
AG+ D Y + G P+
Sbjct: 150 AGIADVYAKSLGRNNPI 166
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/132 (30%), Positives = 72/132 (54%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 226 TSARGSTGPLGN 191
GS L N
Sbjct: 262 GKQLGSNNALNN 273
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 72.9 bits (171), Expect = 6e-12
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 412 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 239
V+ P+ G TVP V G G+ + ++PA RGTG+V+ K + ++AG
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGY 137
Query: 238 QDCYTSARGSTGP 200
D T GST P
Sbjct: 138 TDVLTKIIGSTNP 150
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 72.5 bits (170), Expect = 9e-12
Identities = 71/202 (35%), Positives = 87/202 (43%), Gaps = 7/202 (3%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
KI E + LF P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK--PHTVPCKVTGKCGS 326
GH GL CS EVATAI+ I + L S P+ R GN GK P P ++ S
Sbjct: 98 -GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSVCPMQIRDYHSS 154
Query: 325 VTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGPLGNFXXXXXXXXXX 158
+ LI AP T I+S VPK LL + A D SA G T LG
Sbjct: 155 MLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDALGRLAKTTFDAISK 213
Query: 157 XXXYLTPDLWRDIPLTKSPYSE 92
LTPDLW TK YSE
Sbjct: 214 TYSCLTPDLWNK---TKPLYSE 232
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = -2
Query: 613 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 434
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 433 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 254
++ AK SV+ V + T+P +V K + ++PA GTG+++ + +L
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 253 QMAGVQDCYTSARGSTGPLGN 191
++AGVQ+ G L N
Sbjct: 619 ELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 413
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+ + +G ++ +V G+ G+ V L PAP+GTGI++ + ++++AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 232 CYTSARGSTGPL 197
YT G P+
Sbjct: 178 IYTKNLGRNTPI 189
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 406 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
PV G T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ +
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITN 128
Query: 232 CYTSARGS 209
+ GS
Sbjct: 129 MLSKELGS 136
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 70.1 bits (164), Expect = 5e-11
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = -2
Query: 598 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 419
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 418 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAG 242
+ VR G T+P G+ G+ L PA +GTGIV+ + +L++ G
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 241 VQDCYTSARGS 209
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/132 (29%), Positives = 69/132 (52%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 298
Query: 226 TSARGSTGPLGN 191
S L N
Sbjct: 299 GKQIRSKNALNN 310
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/132 (28%), Positives = 71/132 (53%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 226 TSARGSTGPLGN 191
GS L N
Sbjct: 141 AKQLGSDNLLNN 152
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/132 (27%), Positives = 67/132 (50%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 226 TSARGSTGPLGN 191
GS PL N
Sbjct: 132 AKQLGSNNPLNN 143
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 63.7 bits (148), Expect = 4e-09
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = +3
Query: 189 KFPKGPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCG 368
K PK V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
Query: 369 FPILLPQ*PLRTGKTDN 419
LLP P+ + DN
Sbjct: 71 ACCLLP--PVASTHRDN 85
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = -2
Query: 676 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 497
K+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+
Sbjct: 48 KVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDH 106
Query: 496 NGHIGL 479
NGH L
Sbjct: 107 NGHRAL 112
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 63.3 bits (147), Expect = 5e-09
Identities = 43/131 (32%), Positives = 63/131 (48%)
Frame = -2
Query: 601 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 422
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 421 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 242
K + V R T+ V G + TV L PA GTG+++ + +++ AG
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 241 VQDCYTSARGS 209
+ D T + GS
Sbjct: 154 ITDVLTKSMGS 164
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 62.9 bits (146), Expect = 7e-09
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = -2
Query: 601 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 422
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 421 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 248
K +++ P+R G + G+ G+ G+ V L AP GTGI++ + + +
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFES 166
Query: 247 AGVQDCYTSARGSTGP 200
GV D T + G++ P
Sbjct: 167 LGVADVVTKSVGTSNP 182
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 62.5 bits (145), Expect = 9e-09
Identities = 43/126 (34%), Positives = 62/126 (49%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V IG T P V G+ + V L PA GTG+++ + +L+ AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 226 TSARGS 209
+ GS
Sbjct: 156 AKSLGS 161
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 62.1 bits (144), Expect = 1e-08
Identities = 41/131 (31%), Positives = 65/131 (49%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+ V + PH +V G G+ V L PA GTG+++ + +L+ AGV +
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSN 127
Query: 232 CYTSARGSTGP 200
T GS P
Sbjct: 128 ILTKCLGSHNP 138
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 61.7 bits (143), Expect = 2e-08
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Frame = -2
Query: 604 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 425
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 424 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 251
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++ + + +
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCE 126
Query: 250 MAGVQDCYTSARGSTGPL 197
G+ D T + G+ P+
Sbjct: 127 ACGIHDILTKSYGTNNPV 144
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 61.3 bits (142), Expect = 2e-08
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 412 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 239
++ PV G T+P + G +V L PA GTG+ + + +L GV
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGV 125
Query: 238 QDCYTSARGSTGP 200
D ++GS+ P
Sbjct: 126 TDVLAKSKGSSNP 138
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/126 (30%), Positives = 66/126 (52%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 406 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 227
V I TVP + K + V L PAP+G GI+++ + ++++AG D Y
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 226 TSARGS 209
T + GS
Sbjct: 204 TKSYGS 209
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 60.1 bits (139), Expect = 5e-08
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 413
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+P+R G T+ V G+ G+ V L A GTGI++ + + + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
Query: 232 CYTSARGSTGP 200
+ GS+ P
Sbjct: 135 VVAKSTGSSNP 145
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/128 (28%), Positives = 63/128 (49%)
Frame = -2
Query: 589 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 410
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 409 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 230
+ V T+P +V K G V L PA GTG+++ + +L++AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDV 127
Query: 229 YTSARGST 206
+ G++
Sbjct: 128 LAKSLGAS 135
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/132 (29%), Positives = 65/132 (49%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
++ + G+ I PH V G + L PA GTGIV+ + +L+MAGV++
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
Query: 232 CYTSARGSTGPL 197
+ GS P+
Sbjct: 126 IVAKSLGSNNPM 137
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/128 (30%), Positives = 63/128 (49%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
++ V K T+P +V G V L PA GTG+++ + +L+ AGV++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKN 182
Query: 232 CYTSARGS 209
T + GS
Sbjct: 183 VLTKSMGS 190
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 57.2 bits (132), Expect = 3e-07
Identities = 37/131 (28%), Positives = 65/131 (49%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
++ V N I T+ V G+ G+ V + PA GTGI++ + + ++ GV +
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHN 132
Query: 232 CYTSARGSTGP 200
GST P
Sbjct: 133 ILAKCLGSTNP 143
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 56.0 bits (129), Expect = 8e-07
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = -2
Query: 586 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 413
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+P+R G T+ V GK G+ + L AP+GTGI++ + + ++ G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 232 CYTSARGSTGP 200
+ G++ P
Sbjct: 124 IVAKSMGTSNP 134
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 55.2 bits (127), Expect = 1e-06
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 412 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 239
++ P+R G T+ K G+ + + PAP GTGIV+ +K +M GV
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 238 QDCYTSARGST 206
D + GS+
Sbjct: 122 SDIIAKSYGSS 132
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 54.4 bits (125), Expect = 2e-06
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = -2
Query: 580 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 401
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 400 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 224
+R + HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKA 115
Query: 223 SARGSTGP 200
GS P
Sbjct: 116 KIHGSHHP 123
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = -2
Query: 526 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 347
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 346 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 215
+TG+ + + P P G P +L + G+ C R
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 52.0 bits (119), Expect = 1e-05
Identities = 35/127 (27%), Positives = 60/127 (47%)
Frame = -2
Query: 580 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 401
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 400 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 221
+ + T+ + K S V L A GTGI++ + + ++ GVQD
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 220 ARGSTGP 200
+ GS+ P
Sbjct: 133 SIGSSNP 139
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 48.4 bits (110), Expect = 2e-04
Identities = 38/133 (28%), Positives = 61/133 (45%)
Frame = -2
Query: 595 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 416
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 415 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 236
++ PV R Y + T+ V GK G+V ++L+ P G G+ + ++ + AG+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIH 366
Query: 235 DCYTSARGSTGPL 197
D S P+
Sbjct: 367 DIAARVNRSRNPM 379
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 47.2 bits (107), Expect = 4e-04
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = -2
Query: 562 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 386
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 385 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
N+ T+ VT K V L+ P G G+ ++ + AG+ D S
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHDISARMPRSK 461
Query: 205 GPLGN 191
P+ +
Sbjct: 462 NPMNS 466
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 47.2 bits (107), Expect = 4e-04
Identities = 36/132 (27%), Positives = 62/132 (46%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
++P+RR Y + T+ KV K V + P G G+ + ++ ++AG++D
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKD 362
Query: 232 CYTSARGSTGPL 197
S S P+
Sbjct: 363 LSASIPRSRNPM 374
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = -2
Query: 295 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNF 188
G+ +V+ VPKK+L+ AG++D +TS+RGST L NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 45.6 bits (103), Expect = 0.001
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = -2
Query: 589 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLS 413
N +L V+ QT G++ +F VA GD G +GLG K A+ A+ A S
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRS 207
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+ V R + N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D
Sbjct: 208 MKMVPR--YQNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITD 260
Query: 232 CYTSARGSTGPL 197
+ GS PL
Sbjct: 261 MTCNVYGSRNPL 272
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 45.6 bits (103), Expect = 0.001
Identities = 36/133 (27%), Positives = 62/133 (46%)
Frame = -2
Query: 595 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 416
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 415 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 236
++ P+RR Y + T+ VT K V++ P G G+ + ++ + AG+Q
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQ 354
Query: 235 DCYTSARGSTGPL 197
D + S P+
Sbjct: 355 DLAANIPRSRNPM 367
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 45.2 bits (102), Expect = 0.001
Identities = 35/122 (28%), Positives = 58/122 (47%)
Frame = -2
Query: 562 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 383
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 382 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 203
N+ T+ +VT K VRL P G G+ + ++ + AG++D S
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRDLSAKFLRSRN 435
Query: 202 PL 197
P+
Sbjct: 436 PM 437
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 44.0 bits (99), Expect = 0.003
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = -2
Query: 595 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA-- 422
+L+ + + V T G+ A V G+ G +G G + A R A A
Sbjct: 189 NLHRHAIVLKRVVHMTTKGKDASMYALVIAGNGKGLVGYGEGKDTNASKAGRKAFNAAVK 248
Query: 421 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 242
L + + +G G++ TV ++ K G+ V L P P G G+ PV + + G
Sbjct: 249 NLDSVAIHKGSDGSR-----TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVG 303
Query: 241 VQDCYTSARGSTGPL 197
+ D S GST P+
Sbjct: 304 ITDLSASIYGSTNPV 318
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 39.1 bits (87), Expect = 0.097
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = -2
Query: 541 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 362
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 361 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 209
TV + GS + + P G G+V K ++ G++D + GS
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGS 265
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 39.1 bits (87), Expect = 0.097
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -2
Query: 298 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGPLGNFXXXXXXXXXXXXXYLTPDLWRDI 119
RG + + + KKLL +A +QDCY AR + LGN+ YLT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTEN 64
Query: 118 PLTK 107
TK
Sbjct: 65 VCTK 68
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.39
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 431 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 529
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 36.3 bits (80), Expect = 0.69
Identities = 31/120 (25%), Positives = 51/120 (42%)
Frame = -2
Query: 592 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 413
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 412 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 233
+ PV R Y + T+ V GK +V V+L+ P G G+ + + + G+ D
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 145 LTPDLWRDIPLTKSPYSEF 89
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.1
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = -2
Query: 604 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 425
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 424 AKLSVL 407
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 607 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 443
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 4.8
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -2
Query: 670 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 497
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 496 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 407
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 523 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 371
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Heat shock protein
DnaJ domain protein - Geobacter bemidjiensis Bem
Length = 441
Score = 33.1 bits (72), Expect = 6.4
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 251 LKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDL---VTPVTSSNW*NRQL 421
L+++LR+WRRH+ N + ++A + + DL V + SS +L
Sbjct: 161 LREILRSWRRHHPERQPESNDTKAELARVKREIAVEAQAVHDLSAQVEQLRSSYVCRFKL 220
Query: 422 SKDNSASNGSGDFLAALHTQTNMTVVVA 505
DNS + GS D A + +M VV A
Sbjct: 221 RVDNSLAEGS-DLFAEMIAAADMNVVRA 247
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 580 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 434
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_A3LRX8 Cluster: Predicted protein; n=6;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 343
Score = 33.1 bits (72), Expect = 6.4
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = -2
Query: 562 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE-VATAIRGAIILAKLSVLPVRRGYW 386
V +T G F +GD NG IGLG+ S++ + TA A A ++ P+ R Y
Sbjct: 191 VSLKTSKGNIPNFFVLTVVGDRNGTIGLGIGKSRDGIRTAAVKAHWNAVKNLTPIPR-Y- 248
Query: 385 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 206
+ T+ K +V + + AP G G+ ++ Q AG++D S
Sbjct: 249 -----EERTILGDFEYKYHAVKLFMRSAPAGFGLRVNRNIFEICQAAGIKDLRGKVYKSR 303
Query: 205 GPL 197
PL
Sbjct: 304 NPL 306
>UniRef50_Q890Q2 Cluster: Ribosomal protein; n=1; Clostridium
tetani|Rep: Ribosomal protein - Clostridium tetani
Length = 158
Score = 32.7 bits (71), Expect = 8.4
Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Frame = +3
Query: 201 GPVEPRAEV*QSCTPAI*RSFLGTGADTI-PVPRGAGISRTVTEPHLPVTLQGTVCGFPI 377
G +EP S PA R+ L TG I PVP A I RT P+ P L GTV
Sbjct: 21 GLLEPNDLALTSFIPANSRTAL-TGPPAITPVPSFAVIIRTFPVPNSPSMLCGTVVPTIC 79
Query: 378 LLPQ*PLRTGKTDNLARIIAPRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPARVCF 557
L + L ++ +IA +++ + P P P SP T AL P
Sbjct: 80 TLTKFFL----ASSMPFLIASGISIDLPI----PTPTWPFSSPTTTRALNLKFLPPLTTL 131
Query: 558 CTGMIFRTSSFR 593
T I T SF+
Sbjct: 132 ATLFINTTFSFK 143
>UniRef50_A7PJH9 Cluster: Chromosome chr12 scaffold_18, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr12 scaffold_18, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 499
Score = 32.7 bits (71), Expect = 8.4
Identities = 29/119 (24%), Positives = 51/119 (42%)
Frame = -2
Query: 556 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 377
K T+ GQ ++ A +A G+ +G +G + A++ A ++ V R Y
Sbjct: 354 KVTKGGQVVKYTAILACGNYHGVVGYAKAKGPAIPIALQKAYEKCFQNLHYVER-Y---- 408
Query: 376 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGP 200
+ HT+ V V L PA TG+ + + +L +AG ++ + GS P
Sbjct: 409 --EEHTIAHAVQTTYKKTKVYLWPAQTTTGMKAGRTVQTILNLAGFKNVKSKVIGSRNP 465
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,908,241
Number of Sequences: 1657284
Number of extensions: 15823509
Number of successful extensions: 41834
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 39928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41749
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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