Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0554
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ELC4 Cluster: Hypothetical conserved protein; n=1; Oc...    34   2.9  

>UniRef50_Q8ELC4 Cluster: Hypothetical conserved protein; n=1;
           Oceanobacillus iheyensis|Rep: Hypothetical conserved
           protein - Oceanobacillus iheyensis
          Length = 267

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 123 LLRVIDFFKLIY*VIVILFICVNIKKSFDFLFFLALSTSSVLPADSLE*TSRLQFCLHQR 302
           LL ++    +IY   +I    V +      LFFL+LS   V+    L   S L F LH  
Sbjct: 19  LLLIVVVIAIIYASSIIFLTDVKVYHRQPILFFLSLSLFYVIMGSPLATISHLSFSLHMI 78

Query: 303 PDCLNYYLLP 332
              + Y+++P
Sbjct: 79  QMSILYFIVP 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,254,046
Number of Sequences: 1657284
Number of extensions: 8404396
Number of successful extensions: 21139
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21129
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)