Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0554
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 117 YVLFH*QIDSFFYLKILLVRYHS 49
           YVLF      F  +K+LLVRY +
Sbjct: 156 YVLFFVNFAFFVVVKMLLVRYRN 178



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 481 FQMYFIRFVNQKETLLSKTALVHF 410
           FQMY + FVN    ++ K  LV +
Sbjct: 153 FQMYVLFFVNFAFFVVVKMLLVRY 176


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 117 YVLFH*QIDSFFYLKILLVRYHS 49
           YVLF      F  +K+LLVRY +
Sbjct: 156 YVLFFVNFAFFVVVKMLLVRYRN 178



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 481 FQMYFIRFVNQKETLLSKTALVHF 410
           FQMY + FVN    ++ K  LV +
Sbjct: 153 FQMYVLFFVNFAFFVVVKMLLVRY 176


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 200 FFYVYANK*NNDYLINQFK 144
           F   + +K  +DYLIN FK
Sbjct: 229 FRLTFVDKTASDYLINVFK 247


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 363 SVRYFKNYLDFCIVLL 410
           +V YF+NY+ F   LL
Sbjct: 151 TVEYFQNYIHFFYQLL 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,367
Number of Sequences: 336
Number of extensions: 2598
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)