Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0554
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated...    28   5.5  
U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF022972-4|AAC48236.2|  528|Caenorhabditis elegans Udp-glucurono...    27   9.7  

>U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated
           target of p38mapkprotein 2 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 186 VNIKKSFDFLFFLALSTSSVLPADSLE*TSRLQFCL 293
           VN +K+F+F    ++S   +LP D    T+RL+ C+
Sbjct: 184 VNFQKTFNFPKERSISLEMLLPTDVFTTTARLENCI 219


>U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical
           protein C05D11.8 protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 527 INDAHKKNHCRL-HCRISNVLY*ICQ 453
           ++D+H +NHC L H  I N L+ +C+
Sbjct: 126 VSDSHSQNHCLLVHKPILNPLFRLCE 151


>Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical
           protein F35C5.8 protein.
          Length = 372

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -2

Query: 428 NSSSPFQ*NNTKV*VVFKIAHGSKNSNKPK 339
           ++++ F+ N  K+ +VF   HGS  SN+P+
Sbjct: 131 DATAGFRDNYKKIVIVFTSVHGSYKSNQPR 160


>AF022972-4|AAC48236.2|  528|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein37 protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 162 VIVILFICVNIKKSFDFLFFLAL 230
           ++++LF C N+  S++FL F  L
Sbjct: 3   ILILLFACFNVNFSYNFLIFSPL 25


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,219,730
Number of Sequences: 27780
Number of extensions: 215396
Number of successful extensions: 578
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)