Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0551
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U54982-1|AAC16665.1|  850|Drosophila melanogaster stn-A protein.       29   8.5  
AE014298-3233|ABI31011.1|  850|Drosophila melanogaster CG12500-P...    29   8.5  
AE014298-3232|EAA46058.2|  850|Drosophila melanogaster CG12500-P...    29   8.5  

>U54982-1|AAC16665.1|  850|Drosophila melanogaster stn-A protein.
          Length = 850

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -1

Query: 124 VSQLP----EGMSTHEYVEKKAGIDPGGVTTDPPPVRPSSNMRI 5
           V+QLP    E  S  E+ E+++G +PG     PPPVRP +   I
Sbjct: 401 VAQLPTEAFEAGSWAEF-EEQSGQEPGKPKRPPPPVRPPTGPHI 443


>AE014298-3233|ABI31011.1|  850|Drosophila melanogaster CG12500-PB,
           isoform B protein.
          Length = 850

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -1

Query: 124 VSQLP----EGMSTHEYVEKKAGIDPGGVTTDPPPVRPSSNMRI 5
           V+QLP    E  S  E+ E+++G +PG     PPPVRP +   I
Sbjct: 401 VAQLPTEAFEAGSWAEF-EEQSGQEPGKPKRPPPPVRPPTGPHI 443


>AE014298-3232|EAA46058.2|  850|Drosophila melanogaster CG12500-PA,
           isoform A protein.
          Length = 850

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -1

Query: 124 VSQLP----EGMSTHEYVEKKAGIDPGGVTTDPPPVRPSSNMRI 5
           V+QLP    E  S  E+ E+++G +PG     PPPVRP +   I
Sbjct: 401 VAQLPTEAFEAGSWAEF-EEQSGQEPGKPKRPPPPVRPPTGPHI 443


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,215,212
Number of Sequences: 53049
Number of extensions: 656025
Number of successful extensions: 1248
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)