Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0550
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   6.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   6.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.4  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 436 DLPSELDMPLDGEDEAEV 489
           D+   ++ P+DGED+ +V
Sbjct: 336 DVKRIINQPMDGEDQCDV 353


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 167 EYWLRHSL*MFLTSFDAGYVALA 99
           E  L HS+ +FLT F+A +  LA
Sbjct: 799 EQSLAHSVGVFLTIFNAAHCYLA 821


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 196 QWMSSVANDDEIKITEDLS 252
           QWM  V +  ++K+T ++S
Sbjct: 66  QWMQKVVSFHKLKLTNNIS 84


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 196 QWMSSVANDDEIKITEDLS 252
           QWM  V +  ++K+T ++S
Sbjct: 66  QWMQKVVSFHKLKLTNNIS 84


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 195 QGPRFHAFHRILAKAFVINVLD*F 124
           +GP++    +IL  AF  N+L  F
Sbjct: 119 RGPKWQNRRKILTPAFHFNILQEF 142


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 751 YPQHHVEHH 777
           +PQHH  HH
Sbjct: 175 HPQHHQPHH 183


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 751 YPQHHVEHH 777
           +PQHH  HH
Sbjct: 177 HPQHHQPHH 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,062
Number of Sequences: 336
Number of extensions: 3523
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)