Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0550
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical pr...    31   0.93 
U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical p...    29   3.7  
AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate o...    29   3.7  
AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical
           protein F40F9.6b protein.
          Length = 910

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 349 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 498
           L   T+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 81  LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 131


>Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical
           protein F40F9.6a protein.
          Length = 924

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 349 LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 498
           L   T+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 95  LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 145


>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/87 (24%), Positives = 39/87 (44%)
 Frame = +1

Query: 100 ASATYPASKLVKNIYNECLSQYSVECVKPRTLQWMSSVANDDEIKITEDLSIVKTGTVED 279
           AS  YP +   +NI+N    Q  +    P  + W ++    D     + L+ +K GT++ 
Sbjct: 318 ASFKYPIN-YYRNIFNAKKQQADLVLEMPTLIIWGTADGALDIEAAVDSLNTLKQGTMKK 376

Query: 280 DESADPRLAKDPAYEMFDKVDKFLQSH 360
            E A   + +D    + + + KFL  +
Sbjct: 377 IEGASHWVQQDEPEMVNEHIKKFLNKY 403


>Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical
           protein T22C1.8 protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 265 GTVEDDESADPRLAKDPAYEMFDKVDK 345
           G  +DD+ A  RLAK P+ E  D+ DK
Sbjct: 9   GNSQDDQQASRRLAKKPSDEKVDEKDK 35


>U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical
           protein F18E3.7a protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 366 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 235
           K++ LE+ + F +  V  +   +  G  +I+NC+GL+  K+  D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194


>AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate
           oxidase protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 366 KSMTLEKLVHFVEHFVGRILGQSRVGRFIILNCSGLHDRKIFSD 235
           K++ LE+ + F +  V  +   +  G  +I+NC+GL+  K+  D
Sbjct: 151 KNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLYGGKLAGD 194


>AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical
           protein Y6B3B.9 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 558 DETVFALDPQWFRELDLLLPALNDFSLIF 472
           D  VF+ D +W++ LD LLP   +FS  F
Sbjct: 331 DADVFS-DEEWYKVLDHLLPVAKNFSTEF 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,293,109
Number of Sequences: 27780
Number of extensions: 357510
Number of successful extensions: 1143
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)