Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0549
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    27   0.15 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.15 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.15 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.3  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.6  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 443 WYPRNQMSATEVCAIFEKVSCEILNSSR*ARNPLKL*ISIKLS 315
           W     +SAT +C  F K SC+++  S     P+ L + + LS
Sbjct: 133 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLS 175


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 443 WYPRNQMSATEVCAIFEKVSCEILNSSR*ARNPLKL*ISIKLS 315
           W     +SAT +C  F K SC+++  S     P+ L + + LS
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLS 408


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 443 WYPRNQMSATEVCAIFEKVSCEILNSSR*ARNPLKL*ISIKLS 315
           W     +SAT +C  F K SC+++  S     P+ L + + LS
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLS 408


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 112 VLLLLCKIFNYCFFLNHTFIYKAFLCKSRFY 204
           +  LLC  + YC F+  T      LC   F+
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIYHFF 170



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +1

Query: 112 VLLLLCKIFNYCFFLNHTFIYKAFLCKSRFYFHIKHV**FCFD*NVLLSWFFSITLLYY 288
           +++LLC  + Y  F+  T      +C   +YF+  H+  FC    +       +  +YY
Sbjct: 232 LIILLCIYYFYYAFILFTVHLLLLVC--IYYFYYMHL-LFCCAFIIFTMHLLFLLCIYY 287



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 56  LYLICRSFYGSFIYVMQTEYYCYC 127
           L+L+C  ++   ++ +   YY YC
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYFYC 151


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +2

Query: 284 IIITYFKMYDCSVLLKFKVLKDYGLTANCSRFHN*LFQILH 406
           + +T + M+D   +L+ +   +Y   A+  R    +F ++H
Sbjct: 497 VFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVH 537


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +1

Query: 127 CKIFNYCFFLNHTFIYKAFLCKSRFYF 207
           C IF YC   N  F+     C +   F
Sbjct: 434 CSIFYYCLAYNGGFVPLEQRCNAGLVF 460


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 361 RELFKISQLTFSNIAQTSVA 420
           REL +++Q   +NIAQ + A
Sbjct: 307 RELLRLAQQVNANIAQITAA 326


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 378 FTTDFFKYC 404
           FTTD+FK C
Sbjct: 90  FTTDYFKGC 98


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 378 FTTDFFKYC 404
           FTTD+FK C
Sbjct: 90  FTTDYFKGC 98


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 447 KLVGNFKTPKIEHNI 491
           K   NF  P+I+HN+
Sbjct: 307 KKCSNFTLPEIQHNL 321


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 451 WWEISKPPKSNIT 489
           WWE  + P+S I+
Sbjct: 245 WWEQQQTPRSTIS 257


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 469 PPKSNITYVVKILNVSDTGVPSFEK 543
           P  SN+T+V+ ++ V D    + E+
Sbjct: 562 PILSNVTFVIDVVYVCDVCYSTIEE 586


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 469 PPKSNITYVVKILNVSDTGVPSFEK 543
           P  SN+T+V+ ++ V D    + E+
Sbjct: 287 PILSNVTFVIDVVYVCDVCYSTIEE 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,085
Number of Sequences: 336
Number of extensions: 4070
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)