Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0549
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 35  NDLLIKKLYLICRSFYGSFIYVM 103
           N +L+KK+ ++   FYGS ++ M
Sbjct: 12  NVVLVKKVKIVLLIFYGSIMFSM 34


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 456 GNFKTPKIEHNICGQNLKCV*HW 524
           GN  +P I  NIC     C   W
Sbjct: 362 GNILSPSIHDNICSNGWICEHRW 384


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 257 VGFFQSHFYIIITYFKMYDCSVL 325
           + F+   F ++ TY+K+Y  +V+
Sbjct: 213 ISFYLPLFVMVFTYYKIYRAAVI 235


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 357 LPRTVQDFTTDFFKYC 404
           LPR++QD T   F  C
Sbjct: 84  LPRSMQDSTKKLFNKC 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,861
Number of Sequences: 438
Number of extensions: 4092
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)