Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0548
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 614 PGACGVCLYCVSYN 655
           P  C +  YC++YN
Sbjct: 431 PDDCSIFYYCLAYN 444



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 554 LFNQKFTMLDINCVLPLHLVPGACGV 631
           L N KFT+ DI+  L  HL+    G+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFVGL 59


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 560 NQKFTMLDINCVLPLHLVPGACGV 631
           N KFT LD++  L  HL+    G+
Sbjct: 37  NGKFTALDVDPTLCTHLLYAFVGL 60


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +3

Query: 36  VHLSKQKQTQDKMCDRKAVIKNADMSEEMQQD--AVDCATQALEKFNIEKDIA-AFIKKE 206
           + + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + +
Sbjct: 69  IKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAK 128

Query: 207 FDKKYN 224
           F++  N
Sbjct: 129 FEELNN 134


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 237 CIVGRNFGSYVTHETRHFIYFYLGQ 311
           C+ G     + TH T H  Y Y G+
Sbjct: 70  CLNGATCQDHTTHYTCHCPYGYTGK 94


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +3

Query: 717 LVNYYPRLI 743
           LVN+YPRLI
Sbjct: 89  LVNWYPRLI 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,214
Number of Sequences: 336
Number of extensions: 3808
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)