Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0547
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   1.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   1.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   5.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.6  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 684 GKYRPLTDVTRPDRRPARRCQLLKHLIVDKADRATLFNNI 565
           GKY  L      ++RP    Q++K  I    +   +FN+I
Sbjct: 159 GKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDI 198


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 684 GKYRPLTDVTRPDRRPARRCQLLKHLIVDKADRATLFNNI 565
           GKY  L      ++RP    Q++K  I    +   +FN+I
Sbjct: 159 GKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDI 198


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 684 GKYRPLTDVTRPDRRPARRCQLLKHLIVDKADRATLFNNI 565
           GKY  L      ++RP    Q++K  I    +   +FN+I
Sbjct: 479 GKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDI 518


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 719 KKWQH*APTGDPGNTDR*PML 657
           K W + A  GDP  T+  P++
Sbjct: 466 KLWTNFAKNGDPNPTEENPLI 486


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 719 KKWQH*APTGDPGNTDR*PML 657
           K W + A  GDP  T+  P++
Sbjct: 466 KLWTNFAKNGDPNPTEENPLI 486


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 11  EVHDEIPDRFC 43
           ++HD  PD+FC
Sbjct: 543 QIHDLSPDQFC 553


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,001
Number of Sequences: 336
Number of extensions: 1791
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)