Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0545
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   2.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.2  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +1

Query: 391 LLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSK 543
           +LN YF+ +LS   P+   +   A        ++++ F + + +YK    K
Sbjct: 244 ILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGK 294


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
 Frame = +1

Query: 343 SMNYMFGISVFLLCLVLLN------IYFFYNLSTTK 432
           ++N +FG  + + CL+  N       Y +YN   TK
Sbjct: 248 AINMLFGFPIIIGCLIQFNTIVFSFCYCYYNSKMTK 283



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 343 SMNYMFGISVFLLCLVLLNIYFF 411
           S+N +FG  + + CL+  N   F
Sbjct: 529 SVNRIFGFIIIIGCLIQFNTIVF 551


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 520 QYKIKTSKFTP 552
           QY++K  KFTP
Sbjct: 98  QYRVKIGKFTP 108


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 561 LLYRCKFRCFNLVLFF*VC 505
           LL+ C F  FN+ L F +C
Sbjct: 180 LLFCCAFIFFNMHLLFLLC 198


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 595 ELENIWNTVDNWVD 636
           E EN+ +TV NWV+
Sbjct: 232 EYENVNSTVVNWVN 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,874
Number of Sequences: 336
Number of extensions: 3426
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)