Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0544
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   3.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   5.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.5  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
 Frame = +2

Query: 38  NKLYPNQASFVADNTRL--LTSTPCGFTNVLSAPSVRNLGNNRYQPGYQLSNNRF 196
           NK   N+ S   D  +L            +L+ P  +    N+Y+   Q  NN F
Sbjct: 100 NKTLINETSLQLDENKLDKKNDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNF 154


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
 Frame = +2

Query: 38  NKLYPNQASFVADNTRL--LTSTPCGFTNVLSAPSVRNLGNNRYQPGYQLSNNRF 196
           NK   N+ S   D  +L            +L+ P  +    N+Y+   Q  NN F
Sbjct: 100 NKTLINETSLQLDENKLDKKNDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNF 154


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
 Frame = +2

Query: 38  NKLYPNQASFVADNTRL--LTSTPCGFTNVLSAPSVRNLGNNRYQPGYQLSNNRF 196
           NK   N+ S   D  +L            +L+ P  +    N+Y+   Q  NN F
Sbjct: 100 NKTLINETSLQLDENKLDKKDDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNF 154


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 41  KLYPNQASFVADNTRLLTSTPCGFTNVLSAPSVRNLGNNRYQPGYQL 181
           K  P+ A+ +++ T +     C F N+L   SV +         Y L
Sbjct: 224 KSRPSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSL 270


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 41  KLYPNQASFVADNTRLLTSTPCGFTNVLSAPSVRNLGNNRYQPGYQL 181
           K  P+ A+ +++ T +     C F N+L   SV +         Y L
Sbjct: 224 KSRPSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSL 270


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 41  KLYPNQASFVADNTRLLTSTPCGFTNVLSAPSVRNLGNNRYQPGYQL 181
           K  P+ A+ +++ T +     C F N+L   SV +         Y L
Sbjct: 544 KSRPSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSL 590


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +3

Query: 312  WTTCQTFITTPNRRDPMQSDKTFRRPTCARPKVFKT 419
            WTT  +   +     P  +  T RR T  RP    T
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTST 1070


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 89  LTSTPCGFTNVLSAPSVRNLGNNRYQPGYQLSNNRFVSTSYINR 220
           LTS+P     + + P+     N  YQP   L+N  +   SY N+
Sbjct: 326 LTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTY--PSYYNQ 367


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 523 GGGKQKITAAGQEYAHSCYFQGS 455
           G    K+T +   Y HS Y Q +
Sbjct: 236 GASASKVTLSVPFYGHSWYLQST 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,890
Number of Sequences: 336
Number of extensions: 3267
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)