Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0544
         (559 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M83738-1|AAA60226.1|  593|Homo sapiens protein-tyrosine phosphat...    30   4.8  
BT007405-1|AAP36073.1|  593|Homo sapiens protein tyrosine phosph...    30   4.8  
BC071574-1|AAH71574.1|  583|Homo sapiens PTPN9 protein protein.        30   4.8  
BC010863-1|AAH10863.1|  593|Homo sapiens protein tyrosine phosph...    30   4.8  

>M83738-1|AAA60226.1|  593|Homo sapiens protein-tyrosine phosphatase
           protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 287 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLK 466
           +S R+ RR + +     H +  RS  +   F   NVR P G   AL    RLH+  ++++
Sbjct: 66  HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHHPHKSVQ 124


>BT007405-1|AAP36073.1|  593|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 9 protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 287 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLK 466
           +S R+ RR + +     H +  RS  +   F   NVR P G   AL    RLH+  ++++
Sbjct: 66  HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHHPHKSVQ 124


>BC071574-1|AAH71574.1|  583|Homo sapiens PTPN9 protein protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 287 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLK 466
           +S R+ RR + +     H +  RS  +   F   NVR P G   AL    RLH+  ++++
Sbjct: 56  HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHHPHKSVQ 114


>BC010863-1|AAH10863.1|  593|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 9 protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +2

Query: 287 NSLRQLRRMDNVPDFHYHTKQTRSNAVRQNFPETNVRTPEGVQNALQQNPRLHNHMRTLK 466
           +S R+ RR + +     H +  RS  +   F   NVR P G   AL    RLH+  ++++
Sbjct: 66  HSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIAL-FTARLHHPHKSVQ 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,667,044
Number of Sequences: 237096
Number of extensions: 1873743
Number of successful extensions: 3476
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)