Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0543
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011125-1|AAR82792.1| 1030|Drosophila melanogaster LD07466p pro...    30   4.3  
AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p pro...    30   4.3  
AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA...    30   4.3  

>BT011125-1|AAR82792.1| 1030|Drosophila melanogaster LD07466p
           protein.
          Length = 1030

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 313 CYGFFFCLDGRTSSQPCC*VVTGAHRQQQRK--WRHP 209
           C G  +C D +   QPC  + TGAH ++ R   W +P
Sbjct: 658 CNGHSYCNDQQHCEQPCNNLTTGAHCEKCRTGYWGNP 694


>AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p
           protein.
          Length = 1232

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 313 CYGFFFCLDGRTSSQPCC*VVTGAHRQQQRK--WRHP 209
           C G  +C D +   QPC  + TGAH ++ R   W +P
Sbjct: 860 CNGHSYCNDQQHCEQPCNNLTTGAHCEKCRTGYWGNP 896


>AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA
            protein.
          Length = 1284

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 313  CYGFFFCLDGRTSSQPCC*VVTGAHRQQQRK--WRHP 209
            C G  +C D +   QPC  + TGAH ++ R   W +P
Sbjct: 912  CNGHSYCNDQQHCEQPCNNLTTGAHCEKCRTGYWGNP 948


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,708,455
Number of Sequences: 53049
Number of extensions: 570807
Number of successful extensions: 1091
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)