Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0542
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.99 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.99 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.99 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.99 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   5.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 378 VPIQFKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSH 253
           + IQ     FP+ L   ++I+      ++ CGL    PCF H
Sbjct: 401 IMIQGFSYAFPVNLTIPVSISL----LIAACGLRNGDPCFFH 438


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 378 VPIQFKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSH 253
           + IQ     FP+ L   ++I+      ++ CGL    PCF H
Sbjct: 401 IMIQGFSYAFPVNLTIPVSISL----LIAACGLRNGDPCFFH 438


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 378 VPIQFKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSH 253
           + IQ     FP+ L   ++I+      ++ CGL    PCF H
Sbjct: 401 IMIQGFSYAFPVNLTIPVSISL----LIAACGLRNGDPCFFH 438


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 378 VPIQFKRIPFPITLAFAMTINKSQGQTMSVCGLDLSTPCFSH 253
           + IQ     FP+ L   ++I+      ++ CGL    PCF H
Sbjct: 401 IMIQGFSYAFPVNLTIPVSISL----LIAACGLRNGDPCFFH 438


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 404 GINIFSPRNLPFKMVPSLTFFIIFLMTNRVPLLSRGGFKLRSKIIGDST 550
           G+N+ S  N P  ++    F I   + N + LL   G  L+  I  DST
Sbjct: 645 GLNVVSCINFPLGVLDRGNFDIEIALCNGIFLLLTLGSLLQMVISMDST 693


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 518 KLRSKIIGDSTF 553
           KL+SK++GD T+
Sbjct: 30  KLKSKVVGDETY 41


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 539 GDSTFNCKLCGGMPGKSSEFKNSVG 613
           G+  F CK+CG         K  +G
Sbjct: 159 GERPFKCKICGRAFTTKGNLKTHMG 183


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 162 REQYFLLARL*LIQTNLMVYPLESMQRIIVRVKNTV 269
           R+ + LLA   +I ++   Y +  ++ +   +KNTV
Sbjct: 158 RQMHRLLANYKVITSDEFFYLVSKIESLACELKNTV 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,938
Number of Sequences: 336
Number of extensions: 3696
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)