Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0539
(796 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 313 9e-86
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 268 3e-72
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 167 1e-41
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 167 1e-41
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 155 4e-38
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 129 3e-30
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 4e-29
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 120 1e-27
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 118 4e-27
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 111 5e-25
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 105 5e-23
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 105 5e-23
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 103 2e-22
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 6e-21
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 96 3e-20
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 85 6e-17
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 79 5e-15
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 3e-12
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 69 4e-12
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 64 9e-11
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 64 2e-10
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 59 4e-09
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 7e-06
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 48 9e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 47 2e-05
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 45 6e-05
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 45 6e-05
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 44 1e-04
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 39 0.005
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 34 0.15
SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07) 33 0.35
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7) 31 0.81
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 30 2.5
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 5.7
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 5.7
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 7.6
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) 28 7.6
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 313 bits (769), Expect = 9e-86
Identities = 164/239 (68%), Positives = 184/239 (76%), Gaps = 28/239 (11%)
Frame = +1
Query: 163 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ------------ 306
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 307 ----------GRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTREL 438
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+LAPTREL
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTREL 171
Query: 439 AQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHA 618
AQQIQKVV+ALGD+++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+DMI R L+
Sbjct: 172 AQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNT 231
Query: 619 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 795
IKLFVLDEADEMLSRGFKDQI+DVF L VQV+LLSATMP DVLEV+ FMRD V
Sbjct: 232 RDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVV 290
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 268 bits (657), Expect = 3e-72
Identities = 124/181 (68%), Positives = 155/181 (85%)
Frame = +1
Query: 253 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 432
GFEKPSAIQQRAI P ++GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 433 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 612
ELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GTPGRV+DMI RR L
Sbjct: 76 ELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNL 135
Query: 613 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 792
+IK+ VLDEADEML++GFK+QI+DV++ L QV+LLSAT+P ++LE++ FM DP
Sbjct: 136 RTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDP 195
Query: 793 V 795
+
Sbjct: 196 I 196
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 167 bits (405), Expect = 1e-41
Identities = 83/204 (40%), Positives = 129/204 (63%), Gaps = 7/204 (3%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 381
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 382 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--- 552
DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIF 168
Query: 553 ----VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 720
VHV+V TPGRV D++ ++ + ++ V+DEAD++LS FK + + K L +
Sbjct: 169 VHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENR 228
Query: 721 QVILLSATMPDDVLEVSRCFMRDP 792
Q++L SAT P V + +R P
Sbjct: 229 QILLFSATFPISVRDFKEKHLRKP 252
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 167 bits (405), Expect = 1e-41
Identities = 83/204 (40%), Positives = 129/204 (63%), Gaps = 7/204 (3%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 381
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 382 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--- 552
DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIF 168
Query: 553 ----VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 720
VHV+V TPGRV D++ ++ + ++ V+DEAD++LS FK + + K L +
Sbjct: 169 VHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENR 228
Query: 721 QVILLSATMPDDVLEVSRCFMRDP 792
Q++L SAT P V + +R P
Sbjct: 229 QILLFSATFPISVRDFKEKHLRKP 252
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 155 bits (376), Expect = 4e-38
Identities = 82/198 (41%), Positives = 123/198 (62%), Gaps = 1/198 (0%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 381
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 382 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 558
+ T Q +IL PTRE+A Q++ V+ A+G H + C IGG ++ ED + L+S H
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKS-CH 133
Query: 559 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 738
+ VGTPGRV +I ++ L ++++F+LDEAD++L F+ QI+ +F L + Q++ S
Sbjct: 134 IAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFS 193
Query: 739 ATMPDDVLEVSRCFMRDP 792
AT P+ + + +M +P
Sbjct: 194 ATYPEVLANHLKKYMTEP 211
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 136 bits (330), Expect = 1e-32
Identities = 72/207 (34%), Positives = 118/207 (57%), Gaps = 9/207 (4%)
Frame = +1
Query: 193 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 372
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 373 L-----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 537
L Q ++ R AL +APTRELA+QI DH K C GG +V
Sbjct: 538 LTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQAS 597
Query: 538 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 717
QLE G H +VGTPGR+ D ++R ++ +I+ +LDEAD ML GF IH + + +
Sbjct: 598 QLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMT 657
Query: 718 V----QVILLSATMPDDVLEVSRCFMR 786
Q ++ SAT PD++ ++ F++
Sbjct: 658 AKESRQTLMFSATFPDEIQHLAGSFLK 684
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 129 bits (311), Expect = 3e-30
Identities = 75/205 (36%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Frame = +1
Query: 196 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGKTATFSIS 369
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 370 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLE 546
+L ++D + Q + L+PT ELA+Q KV A+G H + K + + G R +
Sbjct: 163 MLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFP---RGQK 219
Query: 547 SGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADV 720
H+++GTPG + D I + + + +FVLDEAD M++ +G +DQ + K L D
Sbjct: 220 CTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDC 279
Query: 721 QVILLSATMPDDVLEVSRCFMRDPV 795
QV+L SAT +DV++ + + +P+
Sbjct: 280 QVLLFSATYDEDVMKFAETVVPNPI 304
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 125 bits (302), Expect = 4e-29
Identities = 70/212 (33%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Frame = +1
Query: 193 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 372
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKTA F + +
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 373 LQQI------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 525
+ + +S E Q A+ +APTRELA QI + C GG +V
Sbjct: 770 MTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVS 829
Query: 526 EDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM 705
+RQL+SG +++VGTPGR+ D I + + ++ +LDEAD ML GF+ I + +
Sbjct: 830 HQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVES 889
Query: 706 L----SADVQVILLSATMPDDVLEVSRCFMRD 789
+ ++ Q ++ SAT P+++ ++ F+ D
Sbjct: 890 MGMPDKSERQTLMFSATFPEEIQRLAGDFLND 921
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 120 bits (290), Expect = 1e-27
Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Frame = +1
Query: 199 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 378
+F + L + L+ A G +KP+ IQ + P +QGRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 379 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 558
++ A++L PTRELA QI LG + K +GG ++ + L + H
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPH 127
Query: 559 VVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 735
VV+ TPGR+ D I + L+ I+ VLDEAD +L F D + +F + Q +L
Sbjct: 128 VVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLF 187
Query: 736 SATMPDDVLEVSR 774
SAT+ D + E+ +
Sbjct: 188 SATLTDTMGELQK 200
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 118 bits (285), Expect = 4e-27
Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 381
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 382 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 555
++ + L++ TRELA QI K ++ N K GG N+++D + L++
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 556 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 669
H+VVGTPGR+ + + L+ K F+LDE D+ML +
Sbjct: 169 HIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQ 206
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 118 bits (285), Expect = 4e-27
Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 381
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 382 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 555
++ + L++ TRELA QI K ++ N K GG N+++D + L++
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 556 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 669
H+VVGTPGR+ + + L+ K F+LDE D+ML +
Sbjct: 169 HIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQ 206
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 111 bits (268), Expect = 5e-25
Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Frame = +1
Query: 193 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 372
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 373 LQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 540
++ Q TS+ AL+++PTRELA Q +V++ +G+ + IGG +++ + ++
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKR 168
Query: 541 LESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 717
+ ++VV TPGR+ M ++++ VLDEAD +L GF ++ + + L ++
Sbjct: 169 IMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSE 227
Query: 718 VQVILLSATMPDDVLEVSRCFMRDPV 795
Q +L SAT V +++R ++ V
Sbjct: 228 RQTLLYSATQTRSVKDLARLSLQSYV 253
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 110 bits (265), Expect = 1e-24
Identities = 61/197 (30%), Positives = 116/197 (58%), Gaps = 6/197 (3%)
Frame = +1
Query: 214 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQI 384
++ E+ L+GI GF + IQ ++I P ++GRD++ A++G+GKT F + +L ++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKL 637
Query: 385 DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 561
R +I++PTREL+ Q V L H N +GG N + + +L+ GV++
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNL 697
Query: 562 VVGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 735
++ TPGR+ D + T+ L+ N ++ V+DEAD +L GF++++ + ++L + Q +L
Sbjct: 698 LIATPGRLLDHLQNTQGFLYKN-LQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLF 756
Query: 736 SATMPDDVLEVSRCFMR 786
SAT +V ++++ ++
Sbjct: 757 SATQTKNVEDLAKLSLK 773
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 1 VLAQLDLASSFPFSYCG*NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTD 180
+ AQL+L S+ C + S ++ R EDW S S D SY+ + T+D D
Sbjct: 141 IFAQLNLLSAHALLDCTDSQSQNAIR-DEDWYSPSSYASSTDGMSYERNEPHEEDTVDND 199
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 105 bits (251), Expect = 5e-23
Identities = 45/65 (69%), Positives = 58/65 (89%)
Frame = +1
Query: 394 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 573
+RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GT
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
Query: 574 PGRVY 588
PGRV+
Sbjct: 61 PGRVF 65
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 105 bits (251), Expect = 5e-23
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 13/248 (5%)
Frame = +1
Query: 82 SEDWPEDSKNG--PSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYG 255
+E+ PE SK +KD+ +D G++P + D F + ++ + + G
Sbjct: 40 AEEQPEVSKKKRKTAKDESEFD--EGVEPSVAQREGD-----FSKFRISQKTIDNLEDRG 92
Query: 256 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALI 417
IQ G DVI QA++GTGKT +F++ +++++ D + R + L+
Sbjct: 93 ITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLV 152
Query: 418 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 597
+APTRELA+Q+ L +L C GG + SG+ V+VGTPGR+ D +
Sbjct: 153 MAPTRELAKQVGNEFENLKSNLEVYC--IYGGMPYEPQENAINSGLDVLVGTPGRILDFM 210
Query: 598 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD-----VQVILLSATMPDDVL 762
+ L + +K VLDE D ML GF + + +V A+ Q +L SAT+P +
Sbjct: 211 RQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATLPPWAV 270
Query: 763 EVSRCFMR 786
++ +M+
Sbjct: 271 NTAKKYMK 278
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 103 bits (247), Expect = 2e-22
Identities = 51/128 (39%), Positives = 72/128 (56%)
Frame = +1
Query: 412 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 591
L+L PTRELAQQ+Q+V ++G H + GG IR+LE GV + + TPGR+ D
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 592 MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 771
M+ R + VLDEAD ML GF+ QI + + D Q ++ SAT P +V ++
Sbjct: 196 MLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLA 255
Query: 772 RCFMRDPV 795
F+ D V
Sbjct: 256 HDFLSDYV 263
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 98.3 bits (234), Expect = 6e-21
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Frame = +1
Query: 199 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS----I 366
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GKTA F +
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 367 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 543
I+ Q + + + LI APTREL QQI G N A GG N E + L
Sbjct: 578 HIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKAL 637
Query: 544 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 702
+ G +VV TPGR+ D + +A + + + V DEAD M GF FK
Sbjct: 638 QEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFALLFSATFK 690
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +1
Query: 310 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 489
+DVI A++G+GKT F++ ILQ + + + ALIL PTRELA QI + ALG +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 490 KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLS 666
KC +GG ++ L H+++ TPGR+ D + + T+K V+DEAD +L+
Sbjct: 62 KCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILN 121
Query: 667 RGF--KDQIHDV 696
F +D IH V
Sbjct: 122 MDFEKEDYIHRV 133
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 88.6 bits (210), Expect = 5e-18
Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 8/204 (3%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 378
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+G+GKT
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKT--------- 926
Query: 379 QIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACI--GGTNVREDIRQLES 549
A L P L++ + A D + C C+ GG ++ +R+L+
Sbjct: 927 ----------AAFLIPI--LSRIYMEGPPAPPDFSYRSLCRPCVVYGGADIGSQLRELDR 974
Query: 550 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIH---DVFKMLSADV 720
H++V TPGR+ DM+ R + ++I+ VLDEAD ML GF+ QI D M +
Sbjct: 975 NCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGI 1034
Query: 721 -QVILLSATMPDDVLEVSRCFMRD 789
Q ++ SAT P ++ ++R F+ +
Sbjct: 1035 RQTLMFSATFPKEIQMLARDFLEN 1058
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 85.0 bits (201), Expect = 6e-17
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 30/236 (12%)
Frame = +1
Query: 178 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 357
D + +E+F D+NL EL + F+ P+ IQ +++ + GRD+I A++G+GKT
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLA 125
Query: 358 FSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNA----------- 489
+S+ + + T ALIL PTREL QQ+ V + D +
Sbjct: 126 YSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSV 185
Query: 490 -----------KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLF 636
K A GG V L G VVV TPGR+ D+ I
Sbjct: 186 IYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLDLY--------KITYL 237
Query: 637 VLDEADEMLSRGFKDQIHDVFKM---LSADVQVILLSATMPDDVLEVSRCFMRDPV 795
V+DE D ML G ++Q+ + + S Q +L SAT+P+ + ++R + +P+
Sbjct: 238 VMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPI 293
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 79.4 bits (187), Expect = 3e-15
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Frame = +1
Query: 397 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 576
R+ A+++ PTRELA QI + N +C GGT + E I +L+ G ++V TP
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTP 202
Query: 577 GRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHD--------VFKMLSADVQ 723
GR+ DM+T R + VLDEAD M GF+ QI + + D Q
Sbjct: 203 GRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQ 262
Query: 724 VILLSATMPDDVLEVSRCFMRDPV 795
++ SAT P + ++R + P+
Sbjct: 263 TVMFSATFPRQMEALARKILDKPI 286
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 79.0 bits (186), Expect = 4e-15
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 20/162 (12%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISILQ 378
++ + + ++LR + GF KP+ IQ +I P + RD+I A++G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 379 QIDT--------------SIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHA 501
I+ S E Q ALI+APTRELA Q++ ++ + + K A
Sbjct: 192 HIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAA 251
Query: 502 CIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTI 627
+GG + R L+ +VV TPGR++++I++ H +
Sbjct: 252 IVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQVFTHGKPL 293
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 553 VHVVVGTPGRVYDMITRRALHANTIKLF---VLDEADEMLSRGFKDQIHDVFKML 708
V VVV V +T + H + I+L V+DEAD M+ +G +++ + +++
Sbjct: 313 VAVVVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 78.6 bits (185), Expect = 5e-15
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Frame = +1
Query: 151 GMDPG-TLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 321
G +P T D+D + Q V +F + L++++L+ + A +P+ IQ I I VI
Sbjct: 360 GQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVI 419
Query: 322 AQAQSGTGKTATFSISILQQIDTS---------IRECQALILAPTRELAQQIQKVVIALG 474
AQ+G+GKT + ++ ++ ++ +A I+ P RELA QI K +L
Sbjct: 420 CAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLC 479
Query: 475 DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEAD 654
H + IGG + LES V ++V TPG + + L + + V+DEAD
Sbjct: 480 HHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEAD 539
Query: 655 EMLSRGFKDQIHDVFKMLSA 714
M FK ++ +++
Sbjct: 540 TMFDASFKSLTMEILHTINS 559
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 481 LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 612
++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+DMI R L
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVL 44
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 69.7 bits (163), Expect = 3e-12
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +1
Query: 301 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALG 474
+ G+DV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q QK + LG
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELG 375
Query: 475 DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEAD 654
K +GG + VV TPGR ++ L ++++ V DEAD
Sbjct: 376 RFTGLKSSVILGGDS--------------VVATPGRFLHVVMEMELKLSSVEYVVFDEAD 421
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/118 (33%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Frame = +1
Query: 193 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 372
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GKTA F+I +
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPL 159
Query: 373 L---------QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 519
L ++ + + + ALILAPTRELAQQI++ ++ G L + + IGG +
Sbjct: 160 LVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 64.5 bits (150), Expect = 9e-11
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 381
F + + +L+ + G KP IQ++A+ + ++ ++++GTGK+ F +L
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVF---LLPS 218
Query: 382 IDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 558
+ R +I+ PTRELA Q + +V LGD + + + G ++ + L+ +H
Sbjct: 219 VQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLKDSLH 276
Query: 559 ---VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 663
+V+GTP R+++++ K V+DE D+ L
Sbjct: 277 PPRIVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +1
Query: 544 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 723
E GV V+V TPGR+ ++I+R+A+ + V+DE D ML GF+ Q+ + + LS Q
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 724 VILLSATMPDDVLEVSRCFMRDPV 795
+L SAT+P + ++ + PV
Sbjct: 313 TMLFSATIPPSIEAMASRLLNAPV 336
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 348
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GK
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 59.3 bits (137), Expect = 4e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +1
Query: 184 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 363
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 364 ISILQQI---DTSIRECQALILAPTRELAQQ 447
+ IL+++ T + L++ PTRELA Q
Sbjct: 66 LPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +1
Query: 610 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ---VILLSATMP-DDVLEVSRC 777
L +IK+ VLDEADEML++GFK+QI+DV++ L Q V L ++P + L + C
Sbjct: 31 LDTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQNSYVEYLHESVPKSEPLSSNSC 90
Query: 778 FMRDPV 795
DP+
Sbjct: 91 SPGDPL 96
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 7e-06
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Frame = +1
Query: 406 QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--VHVVVGTPG 579
+A++++PTRELAQQI + L + H + N + +S ++V TP
Sbjct: 207 RAVVVSPTRELAQQIYREFCHLAKGCAFRIHV-LTKANASTNTFGAKSSKRFDILVTTPN 265
Query: 580 RVYDMITRR--ALHANTIKLFVLDEADEMLSR---GFKDQIHDVFKMLS-ADVQVILLSA 741
R+ ++T+ + + ++ +LDEAD++ GF++QI +++ + D+ L SA
Sbjct: 266 RLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSA 325
Query: 742 TMPDDVLE 765
T+ + + E
Sbjct: 326 TLSNGIEE 333
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 48.0 bits (109), Expect = 9e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 553 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 708
V +V GTPG++ D IT + + +K F+LDEAD +L++G D I ++ +
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 193 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 351
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 628 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 795
+ VLDEAD M+ GF++ + +F + Q +L SATMP + ++ + PV
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPV 73
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 628 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 795
+ VLDEAD M+ GF++ + +F + Q +L SATMP + ++ + PV
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPV 73
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 625 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 795
+++ VLDEAD ML GF I V L A Q +L SAT DD+ ++ + +P+
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPL 60
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 38.7 bits (86), Expect = 0.005
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Frame = +1
Query: 253 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-------CQ 408
G P+++Q+ ++GRDV A G+GK + + I+ QI ++S+ +
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPL 265
Query: 409 ALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 585
LIL + ++ V L + + GG + I L +G V+V TP
Sbjct: 266 VLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVATPPCF 325
Query: 586 YDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHD 693
M+ R + + V D+AD ML+ F +I D
Sbjct: 326 LRMLKRCYTSLDRLCHVVFDDAD-MLAEYFTAEIKD 360
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 33.9 bits (74), Expect = 0.15
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
Frame = +1
Query: 241 IYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 420
I+ Y P Q I+ ++++ +G GKT ++ ++ + + + +
Sbjct: 105 IWIYPTNYPVRDYQFNIVQKALYQNIMVTLPTGLGKTFIAAV-VMYNYYRWYPQGKVVFM 163
Query: 421 APTREL-AQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 597
APT+ L AQQI+ +G + A + G L V TP + + +
Sbjct: 164 APTKPLVAQQIEACYKIMG--IPQTDTAEMTGNMAPTKRENLWRTKRVFFLTPQVLQNDL 221
Query: 598 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 774
+R + A + L V+DEA + L Q+ + + +V+ LSAT DD+ V +
Sbjct: 222 SRGSCAAADVVLLVVDEAHKALGNHSYCQVVREILSYTTNFRVLALSATPGDDIKAVQQ 280
>SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07)
Length = 721
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -1
Query: 616 HEAHDELSYHIHDLECPP---PHEHHSPVGEYLHGHWC 512
HE ++Y H+ CP PHEH P+ H H C
Sbjct: 657 HENMGPMNYLSHEHMCPMNNVPHEHMGPINNVSHEHMC 694
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 73 ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 243
E+ +E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 244 YAYGFEKPSA 273
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7)
Length = 472
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 547 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 726
S V ++ G PG V I + +NT + + D D M S D + ++ D
Sbjct: 376 SSVDIIDGNPGHVMSTIATDDVTSNTDDIMIEDNPDNMTSNISTDDVTSNDDIMIEDNPD 435
Query: 727 ILLSATMPDDVLEVSRC 777
+ S DDV + C
Sbjct: 436 NMTSNIATDDVTSKTGC 452
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 670 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 795
GF+ +I + + D Q ++ SAT P V ++ +M DPV
Sbjct: 2 GFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPV 43
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 202 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 336
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +1
Query: 115 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 288
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1228 PSDEVGTLESTQMCDKIYLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSSSA 1285
Query: 289 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 408
P + G D +I Q+ GKT SI QQ+DT RE Q
Sbjct: 1286 --PSLMGTDEIICQSLEHAGKTPPALSSISQQLDTR-REIQ 1323
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 259 EKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 408
+KP + A P + G D +I Q++ GKT SI QQ+DT RE Q
Sbjct: 1567 DKPPKVSFSA--PSLMGTDEIICQSREHAGKTPPALSSIPQQLDTG-REIQ 1614
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 532 IRQLESGVHVVVGTPGRVYDMIT 600
I +L+ G ++V TPGR+ DM+T
Sbjct: 1 IAELKRGAEIIVCTPGRMIDMLT 23
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 112 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 240
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 379 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 507
Q D++++E IL ELA++IQK++ LN K AC+
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 301 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 402
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 55 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGP 147
+M Y SER P D P+ D GS D P
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNP 1201
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +1
Query: 226 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 405
E+ + + GF A Q++A+M + G + +G GK+ + + S C
Sbjct: 512 EVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRS--PC 569
Query: 406 QALILAPTRELAQ 444
L+++P L +
Sbjct: 570 LTLVISPLVSLME 582
>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
Length = 1325
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 532 IRQLESGVHVVVGTPGRVYDMITRRALHA 618
+RQ+ + V TP VYDM TR+ HA
Sbjct: 1129 VRQVNTTAIPRVSTPRHVYDMQTRQLFHA 1157
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 495 AFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 382
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,548,752
Number of Sequences: 59808
Number of extensions: 623667
Number of successful extensions: 2692
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2640
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -