Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0538
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q47V06 Cluster: Asparaginase; n=2; Gammaproteobacteria|...    34   3.3  
UniRef50_Q239A7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q47V06 Cluster: Asparaginase; n=2;
           Gammaproteobacteria|Rep: Asparaginase - Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 342

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/50 (28%), Positives = 30/50 (60%)
 Frame = -3

Query: 186 RLMTIRVSDTQPNYKAMSRSRTELKKKKLPNKHMLISHISI*TVCRIKSV 37
           +L+  ++ DT   YK++ R++ ++KK K  NK    +H ++ T  ++ +V
Sbjct: 159 KLVDNKIFDTDHRYKSLQRAKAKMKKAKQQNKDYQAAHFALDTEYKVGTV 208


>UniRef50_Q239A7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 472

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 154 LSIRNTNRHQSPYKLTYIQKLLNPILHSDLAPCYKNKNH 270
           LSI+      S +KL   QK++N  L +D  P Y N N+
Sbjct: 333 LSIKELTISSSKHKLDMSQKMMNESLKNDFTPTYNNNNN 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,842,513
Number of Sequences: 1657284
Number of extensions: 11886071
Number of successful extensions: 25324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25320
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)