Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0538
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-397|AAF47599.2| 1019|Drosophila melanogaster CG5691-PA ...    29   6.9  
AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOM...    29   9.1  
AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA...    29   9.1  
AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD...    29   9.1  

>AE014296-397|AAF47599.2| 1019|Drosophila melanogaster CG5691-PA
           protein.
          Length = 1019

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 211 KLLNPILHSDLAPCYKNKNHNDSLNERKYLLVLSLLSH 324
           KL +P+ H DL   YK+ N+   LN    LL L  L H
Sbjct: 528 KLKSPVFHMDLLNIYKD-NYKALLNTPAMLLFLKHLKH 564


>AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOMINO A
            protein.
          Length = 3201

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 166  NTNRHQSPYKLTYIQKLLNPILHSDLAPCYKNKNHNDSLNERKY 297
            N N     Y L+++ +L  PI  +DL P Y  K H  S  +  Y
Sbjct: 2030 NDNDIYIDYSLSFMYEL-EPIAETDLPPVYVRKEHKRSRTDAGY 2072


>AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA,
            isoform A protein.
          Length = 3198

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 166  NTNRHQSPYKLTYIQKLLNPILHSDLAPCYKNKNHNDSLNERKY 297
            N N     Y L+++ +L  PI  +DL P Y  K H  S  +  Y
Sbjct: 2030 NDNDIYIDYSLSFMYEL-EPIAETDLPPVYVRKEHKRSRTDAGY 2072


>AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD,
            isoform D protein.
          Length = 3183

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 166  NTNRHQSPYKLTYIQKLLNPILHSDLAPCYKNKNHNDSLNERKY 297
            N N     Y L+++ +L  PI  +DL P Y  K H  S  +  Y
Sbjct: 2030 NDNDIYIDYSLSFMYEL-EPIAETDLPPVYVRKEHKRSRTDAGY 2072


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,029,975
Number of Sequences: 53049
Number of extensions: 530543
Number of successful extensions: 970
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)