Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0537
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IZT7 Cluster: Os09g0551000 protein; n=4; Magnoliophyt...    36   1.2  
UniRef50_A3Y514 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_Q8II55 Cluster: Putative uncharacterized protein; n=2; ...    34   4.8  
UniRef50_A2DJ13 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  

>UniRef50_Q0IZT7 Cluster: Os09g0551000 protein; n=4;
            Magnoliophyta|Rep: Os09g0551000 protein - Oryza sativa
            subsp. japonica (Rice)
          Length = 3032

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = +2

Query: 38   SPITTYMFLTTFIRIIDSRMALFGEILDESSKYICLTLDTSKPRICMLVKKITRYYIYQW 217
            +P T YM L+ ++++  S +  F  + ++  +YI  ++    P    ++    RY   +W
Sbjct: 1743 APWTGYMMLSRYLQVNSSDIFYFSVVDNDEKRYITFSVSEGSPHTRYVITYAGRYQFQRW 1802

Query: 218  NL 223
            N+
Sbjct: 1803 NI 1804


>UniRef50_A3Y514 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MED121|Rep: Putative uncharacterized
           protein - Marinomonas sp. MED121
          Length = 157

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 15/50 (30%), Positives = 35/50 (70%)
 Frame = -3

Query: 195 VIFLTSMQILGLLVSSVKQIYLLLSSNISPKRAMRLSIILINVVKNIYVV 46
           V++L +MQ+LG ++SS+  +YL++ + +  K+  R+++I I+V   ++ +
Sbjct: 91  VLYLFAMQLLGFVISSMMFLYLIMFA-LGKKQHWRIALISISVTAVVWFI 139


>UniRef50_Q8II55 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1352

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +2

Query: 593 VLTLVFYFIYYSINK*KH*FKTLCLKCFVNIEINYKYYHYIFNLISNLKKKTLSNQQ 763
           V+ L+  +I Y++NK       LCL  FVN  +N K      N+ISN+  K + N +
Sbjct: 145 VIKLIILYIKYNMNKFSFIKLCLCLNYFVN--LNIKNEPSFNNIISNIIMKKIKNDE 199


>UniRef50_A2DJ13 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1230

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +2

Query: 668 KCFVNIEINYKYYHYIF---NLISNLKKKTLSN 757
           KCF+N  +N++ YHY F   ++I  LK   + N
Sbjct: 216 KCFINFTLNFQSYHYFFSNNDMIKQLKSNFIDN 248


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,011,741
Number of Sequences: 1657284
Number of extensions: 11835345
Number of successful extensions: 21825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21820
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)