Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0536
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.2  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    22   5.1  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   6.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   6.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 594 YIQYVLPSVYAGW 556
           Y +Y++P+ Y+GW
Sbjct: 196 YKEYIIPANYSGW 208


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 594 YIQYVLPSVYAGW 556
           Y +Y++P+ Y+GW
Sbjct: 196 YKEYIIPANYSGW 208


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 174 IFIFKLTLILVFCQVVL*KYNFKSCKPTYSTNMLVEK 64
           +FI  LT+ +V CQ     + + + K + S   L  +
Sbjct: 9   LFILSLTITIVMCQTFTYSHGWTNGKRSTSLEELANR 45


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 535 YCKNTAAHCVLNPLVAFYDNHGKRC 461
           Y + +   C  NP +     HG++C
Sbjct: 79  YLEPSPPFCEKNPKLGILGTHGRQC 103


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 535 YCKNTAAHCVLNPLVAFYDNHGKRC 461
           Y + +   C  NP +     HG++C
Sbjct: 80  YLEPSPPFCEKNPKLGILGTHGRQC 104


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 223 VINVHIYNDYHLWLKYYSIGTN 288
           V+    Y+     LKYY +G+N
Sbjct: 295 VLLTEAYSSLENTLKYYEVGSN 316


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,758
Number of Sequences: 438
Number of extensions: 3799
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)