Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0535
(354 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 26 0.11
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 26 0.11
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 26 0.11
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 3.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 4.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 4.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 4.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 20 7.5
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 20 7.5
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 20 7.5
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 20 7.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 20 9.9
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 20 9.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 9.9
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 26.2 bits (55), Expect = 0.11
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 54 LNNTIS-SLTSCNCEFRSLKSLGNSSDPHTQLFYGTSKS*TNIIALICVYKL 206
L NT S + SC+C+ + L NS+D + F G K N+I C YKL
Sbjct: 78 LTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVG--KMYFNLIDTKC-YKL 126
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 26.2 bits (55), Expect = 0.11
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 54 LNNTIS-SLTSCNCEFRSLKSLGNSSDPHTQLFYGTSKS*TNIIALICVYKL 206
L NT S + SC+C+ + L NS+D + F G K N+I C YKL
Sbjct: 83 LTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVG--KMYFNLIDTKC-YKL 131
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 26.2 bits (55), Expect = 0.11
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 54 LNNTIS-SLTSCNCEFRSLKSLGNSSDPHTQLFYGTSKS*TNIIALICVYKL 206
L NT S + SC+C+ + L NS+D + F G K N+I C YKL
Sbjct: 83 LTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVG--KMYFNLIDTKC-YKL 131
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 99 RSLKSLGNSSDPHT 140
R+L SLG+ SD HT
Sbjct: 35 RTLTSLGDLSDVHT 48
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 59 KDLRITPNKL-WKPDILMYN 77
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 59 KDLRITPNKL-WKPDILMYN 77
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 59 KDLRITPNKL-WKPDILMYN 77
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 59 KDLRITPNKL-WKPDILMYN 77
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 59 KDLRITPNKL-WKPDILMYN 77
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 59 KDLRITPNKL-WKPDILMYN 77
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 127 KDLRITPNKL-WKPDILMYN 145
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -3
Query: 262 EEIRLLPNKIYWLDLLIVYN 203
+++R+ PNK+ W +++YN
Sbjct: 127 KDLRITPNKL-WKPDILMYN 145
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 338 TLNFHYTIILD*DGRY 291
T+NF Y++ L DG++
Sbjct: 473 TINFTYSLALSPDGQF 488
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 142 SYFTEHQRAEPTLS 183
SY T +R +PT+S
Sbjct: 722 SYLTSLERTQPTMS 735
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 112 HSEIQVILIHSYFTEHQRAEPTLSH 186
H E+ ++ + YF ++ E TL H
Sbjct: 383 HVEVARLIRNYYFESNKIDETTLKH 407
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 112 HSEIQVILIHSYFTEHQRAEPTLSH 186
H E+ ++ + YF ++ E TL H
Sbjct: 383 HVEVARLIRNYYFESNKIDETTLKH 407
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -3
Query: 121 FPSDLRDLNSQLHDVN 74
+PSDLR + S++ ++N
Sbjct: 213 WPSDLRTIYSRVRNLN 228
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 93 HNYMTSMRKLYYLI 52
+NY + +KLYY I
Sbjct: 98 YNYNNNCKKLYYNI 111
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 221 FIDCL*FIDAN*CDN 177
F+D + +D N CDN
Sbjct: 172 FVDLVIDVDPNNCDN 186
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 93 HNYMTSMRKLYYLIFS 46
+NY + +KLYY I +
Sbjct: 345 NNYNNNCKKLYYNIIN 360
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,355
Number of Sequences: 438
Number of extensions: 1858
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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