Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0531
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    29   0.16 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    29   0.16 
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    25   2.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.9  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.7  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +1

Query: 358 CVKIMYVMYSTKLASAWLKCQRTPNCTQSCWSHLLC 465
           C     V Y T L +A   C  TPN T + WSH  C
Sbjct: 164 CYYHFTVEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +1

Query: 358 CVKIMYVMYSTKLASAWLKCQRTPNCTQSCWSHLLC 465
           C     V Y T L +A   C  TPN T + WSH  C
Sbjct: 164 CYYHFTVEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 492 TVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLK----VDTENFLSPDTCGGIELVAA 659
           T  +R  +T+K+L E+L G +QT+     K+   L+     D       D   G  LVA+
Sbjct: 142 TTRLRAERTEKSLKEALEGCSQTETPVNGKRGRNLRSTEEADDAKRAKNDAPSGSSLVAS 201

Query: 660 RG 665
            G
Sbjct: 202 AG 203


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 203 RGGVQHRKGPSCPAATSQDYGIL*KEGEAG*TSEEDPIFEHAEPSS 340
           RGG   R  P+ P  ++ +  I+ KE  A    ++ P F+ A P S
Sbjct: 176 RGGAAIRTAPASPFPSAPNQQIIYKEQTANLQVQKVPAFQ-AMPES 220


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 342 DELGSACSKIGSS 304
           D LGSACS++ SS
Sbjct: 72  DSLGSACSQLSSS 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,628
Number of Sequences: 2352
Number of extensions: 14421
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)