Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0529
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011332-1|AAR96124.1| 2167|Drosophila melanogaster SD18415p pro...    29   5.7  
AY069438-1|AAL39583.2| 1279|Drosophila melanogaster LD14917p pro...    29   5.7  
AE014134-2557|AAN10886.1| 2167|Drosophila melanogaster CG7595-PB...    29   5.7  
AE014134-2556|AAF53435.1| 2167|Drosophila melanogaster CG7595-PA...    29   5.7  

>BT011332-1|AAR96124.1| 2167|Drosophila melanogaster SD18415p protein.
          Length = 2167

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 388  YQAPNPAG*RKLIVIFIIHNRTSSQYLTRL*SLEASKTGCKFL--FKYKILIL 540
            +Q+PN    R L+V F+   +  S+Y+  L    A   G  FL  FK  ++IL
Sbjct: 1537 FQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPSDGTSFLSFFKGDLIIL 1589


>AY069438-1|AAL39583.2| 1279|Drosophila melanogaster LD14917p
           protein.
          Length = 1279

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 388 YQAPNPAG*RKLIVIFIIHNRTSSQYLTRL*SLEASKTGCKFL--FKYKILIL 540
           +Q+PN    R L+V F+   +  S+Y+  L    A   G  FL  FK  ++IL
Sbjct: 649 FQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPSDGTSFLSFFKGDLIIL 701


>AE014134-2557|AAN10886.1| 2167|Drosophila melanogaster CG7595-PB,
            isoform B protein.
          Length = 2167

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 388  YQAPNPAG*RKLIVIFIIHNRTSSQYLTRL*SLEASKTGCKFL--FKYKILIL 540
            +Q+PN    R L+V F+   +  S+Y+  L    A   G  FL  FK  ++IL
Sbjct: 1537 FQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPSDGTSFLSFFKGDLIIL 1589


>AE014134-2556|AAF53435.1| 2167|Drosophila melanogaster CG7595-PA,
            isoform A protein.
          Length = 2167

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 388  YQAPNPAG*RKLIVIFIIHNRTSSQYLTRL*SLEASKTGCKFL--FKYKILIL 540
            +Q+PN    R L+V F+   +  S+Y+  L    A   G  FL  FK  ++IL
Sbjct: 1537 FQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPSDGTSFLSFFKGDLIIL 1589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,204,822
Number of Sequences: 53049
Number of extensions: 424978
Number of successful extensions: 741
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)